RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ZNF75DP51815 510 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TUBB4BP68371 445 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 GAD2Q05329 585 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ZBTB17Q13105 803 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 PTPRCAPQ14761 206 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 RABEP1Q15276 862 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ETFDHQ16134 617 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 MEP1BQ16820 701 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TYSND1Q2T9J0 566 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 WSCD2Q2TBF2 565 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 C2orf76Q3KRA6 126 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ATP13A5Q4VNC0 1218 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 SETMARQ53H47 684 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 CAVIN4Q5BKX8 364 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 MTX3Q5HYI7 312 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 GLRA4Q5JXX5 417 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 PIK3CD-AS1Q5SR53 167 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 C6orf10Q5SRN2 563 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 PLA2G4FQ68DD2 849 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TEX38Q6PEX7 206 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ZNF793Q6ZN11 406 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 LINC00696Q6ZRV3 163 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 MTSS1LQ765P7 747 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 PIP4P1Q86T03 277 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 NLRP14Q86W24 1093 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 KLHL7Q8IXQ5 586 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 SLC7A5P1Q8MH63 180 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 AFAP1Q8N556 730 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 NRACQ8N912 160 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TEX45Q8NA69 505 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 NEXN-AS1Q8NBZ9 246 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 OR1J2Q8NGS2 313 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TAS1R2Q8TE23 839 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 SLC35F5Q8WV83 523 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 KRT35Q92764 455 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 CORO2AQ92828 525 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ERGIC1Q969X5 290 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 NXNL1Q96CM4 212 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 CFAP36Q96G28 342 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 DHTKD1Q96HY7 919 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 CABS1Q96KC9 395 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 CAMK1GQ96NX5 476 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 GFM1Q96RP9 751 aaKnown RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 SMC6Q96SB8 1091 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 WDR83Q9BRX9 315 aaKnown RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 MSTO1Q9BUK6 570 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ACAT2Q9BWD1 397 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TRIM7Q9C029 511 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 TMEM39BQ9GZU3 492 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 PPP1R3EQ9H7J1 279 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 MAP6D1Q9H9H5 199 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 RRAGDQ9NQL2 400 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 THSD1Q9NS62 852 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 AIPL1Q9NZN9 384 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 SEPT10Q9P0V9 454 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 SPATA7Q9P0W8 599 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 STK39Q9UEW8 545 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 ARMCX3Q9UH62 379 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 TTC7AQ9ULT0 858 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 DUSP12Q9UNI6 340 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 LIPT1Q9Y234 373 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 KCNK7Q9Y2U2 307 aa3.25□□□□□ -1.89
CD44-229ENST00000528672 V9GYY5 206 aaPredicted RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 CFAP65Q6ZU64 1925 aaKnown RBP3.25□□□□□ -1.89
CD44-229ENST00000528672 IGSF1Q8N6C5 1336 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 ZNF541Q9H0D2 1346 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 SYNJ2BP-COX16A0A087WUM0 186 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 TMEM272A0A1B0GTI8 110 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 LRRD1A4D1F6 860 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 TMEM8BA6NDV4 472 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 EIF4E1BA6NMX2 242 aaKnown RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 E5RJQ4 531 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 IFIT3O14879 490 aaKnown RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 MCF2LO15068 1137 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 KERAO60938 352 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 MOSPD3O75425 235 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 KCNK5O95279 499 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 PAHP00439 452 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 ZFYP08048 801 aaPredicted RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 SNRNP70P08621 437 aaKnown RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 G6PDP11413 515 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 PRF1P14222 555 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 MAOAP21397 527 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 NR2F2P24468 414 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 NMBRP28336 390 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 HOXA11P31270 313 aaPredicted RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 KCNJ4P48050 445 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 RAD23BP54727 409 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 RPS13P62277 151 aaKnown RBP3.24□□□□□ -1.89
CD44-229ENST00000528672 SPOCK1Q08629 439 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 C17orf67Q0P5P2 114 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 HSPB3Q12988 150 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 MTX1Q13505 466 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 RCN2Q14257 317 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 ANKRD20A4Q4UJ75 823 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 KRTCAP3Q53RY4 240 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 ANKRD20A8PQ5CZ79 823 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 EPHA10Q5JZY3 1008 aa3.24□□□□□ -1.89
CD44-229ENST00000528672 ANKRD20A2Q5SQ80 823 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms