RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ILF2Q12905 390 aaKnown RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZNF460Q14592 562 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 USP10Q14694 798 aaKnown RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TMED2Q15363 201 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DUOXA1Q1HG43 343 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZNF658BQ4V348 819 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 XKR5Q6UX68 686 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CHST15Q7LFX5 561 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CMC1Q7Z7K0 106 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SIDT2Q8NBJ9 832 aaKnown RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GIMAP7Q8NHV1 300 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KCNJ9Q92806 393 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SKA1Q96BD8 255 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LINC00615Q96LM1 132 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 OR2M4Q96R27 311 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SARS2Q9NP81 518 aaKnown RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 FSCN3Q9NQT6 498 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 FAM8A1Q9UBU6 413 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RAB23Q9ULC3 237 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SNX11Q9Y5W9 270 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KNL1Q8NG31 2342 aa11.95□□□□□ -0.5
TRAF3IP2-211ENST00000528599 IQANK1A0A1B0GTG1 560 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 E5RI56 91 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PHGDHO43175 533 aaKnown RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 VPS26AO75436 327 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RASGRP1O95267 797 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 FTH1P02794 183 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CFIP05156 583 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RETP07949 1114 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ACP5P13686 325 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CD9P21926 228 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 AOAHP28039 575 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GMPRP36959 345 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MPLP40238 635 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DPP6P42658 865 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CSRP3P50461 194 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DMTNQ08495 405 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TCEA2Q15560 299 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZKSCAN8Q15776 578 aaPredicted RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PLA2G2CQ5R387 149 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TCEAL6Q6IPX3 200 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TAOK1Q7L7X3 1001 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PHACTR4Q8IZ21 702 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RIBC1Q8N443 379 aaPredicted RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 OXR1Q8N573 874 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LILRA3Q8N6C8 439 aaPredicted RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CEP76Q8TAP6 659 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CD200R1Q8TD46 325 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TCEAL3Q969E4 200 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PANX3Q96QZ0 392 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TMEM168Q9H0V1 697 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CAPN10Q9HC96 672 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LATS2Q9NRM7 1088 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SNX15Q9NRS6 342 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RXFP3Q9NSD7 469 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SPATS2LQ9NUQ6 558 aaKnown RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DNAJC28Q9NX36 388 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TAS2R13Q9NYV9 303 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DHRS7Q9Y394 339 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PCDHGA5Q9Y5G8 931 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DNMT3AQ9Y6K1 912 aaPredicted RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MGAT4DA6NG13 374 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 F8W8V4 182 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TPP1O14773 563 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RFPL1O75677 317 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TNFP01375 233 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CSF2P04141 144 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 NME1P15531 152 aaKnown RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 JUNDP17535 347 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MAGEA12P43365 314 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC12A2P55011 1212 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 NFE2L1Q14494 772 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 INSCQ1MX18 579 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TRIM61Q5EBN2 209 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PAQR3Q6TCH7 311 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TIFABQ6ZNK6 161 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 FAM83HQ6ZRV2 1179 aaPredicted RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 AMZ2Q86W34 360 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 OR2L2Q8NH16 312 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CCL4L1Q8NHW4 92 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ELMO1Q92556 727 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ISL2Q96A47 359 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MTBPQ96DY7 904 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TSSK1BQ9BXA7 367 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ERVMER34-1Q9H9K5 563 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TRNAU1APQ9NX07 287 aaKnown RBP11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC6A14Q9UN76 642 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CDYLQ9Y232 598 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DNAJC16Q9Y2G8 782 aa11.94□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms