RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CCDC167Q9P0B6 97 aa14.54□□□□□ -0.08
ECHDC1-220ENST00000528402 A8MX80 341 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 H0Y858 1186 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 IFRD1O00458 451 aaPredicted RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 TRIM38O00635 465 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 PPP6CO00743 305 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 NVLO15381 856 aaKnown RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 GPR39O43194 453 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 NUAK1O60285 661 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 KATNA1O75449 491 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 FTH1P02794 183 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 CA3P07451 260 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HIST1H2AGP0C0S8 130 aaPredicted RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HGFP14210 728 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HIST1H2ADP20671 130 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 AGTR2P50052 363 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HNMTP50135 292 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 FOXA1P55317 472 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 PSME3P61289 254 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ERVK-8P63133 956 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 TRAP1Q12931 704 aaKnown RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 GBX1Q14549 363 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ZNF423Q2M1K9 1284 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 KIF19Q2TAC6 998 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ZNF284Q2VY69 593 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 GK5Q6ZS86 529 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 GOLGA7Q7Z5G4 137 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 MILR1Q7Z6M3 343 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HPS6Q86YV9 775 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 SPNS2Q8IVW8 549 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ETFBKMTQ8IXQ9 262 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 PPP2R3CQ969Q6 453 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 RHBDF1Q96CC6 855 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HIST1H2AHQ96KK5 128 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 MARK4Q96L34 752 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 VPS35Q96QK1 796 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 HIST1H2AJQ99878 128 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 EGFL8Q99944 293 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 H2AFJQ9BTM1 129 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 NTMT1Q9BV86 223 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 NOL11Q9H8H0 719 aaKnown RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 PCDH12Q9NPG4 1184 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 CACNA2D2Q9NY47 1150 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 DEC1Q9P2X7 70 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 EPS15L1Q9UBC2 864 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 POLG2Q9UHN1 485 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 EIF2B4Q9UI10 523 aaKnown RBP14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 CROTQ9UKG9 612 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ANGPTL3Q9Y5C1 460 aa14.53□□□□□ -0.08
ECHDC1-220ENST00000528402 ATP6AP2A0A1C7CYW4 349 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 MRASO14807 208 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 CFLARO15519 480 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 MAP3K7O43318 606 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 TULP3O75386 442 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ATP6AP2O75787 350 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 PDE5AO76074 875 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ALDOCP09972 364 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 LINC00032P0C843 101 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 EBLN1P0CF75 366 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ACADSP16219 412 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ITGB6P18564 788 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 FSHRP23945 695 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 CA5AP35218 305 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 GGT5P36269 586 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 FOXM1Q08050 763 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ELP6Q0PNE2 266 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 MAD2L1Q13257 205 aaPredicted RBP14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 TAF11Q15544 211 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 MUM1Q2TAK8 710 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 PDCD4Q53EL6 469 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 REP15Q6BDI9 236 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 RBM23Q86U06 439 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 KBTBD6Q86V97 674 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 GALNT13Q8IUC8 556 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 TMEM126BQ8IUX1 230 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 DDHD1Q8NEL9 900 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 METTL6Q8TCB7 284 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 LKAAEAR1Q8TD35 194 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 CYB5D2Q8WUJ1 264 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 UCMAQ8WVF2 138 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 DNAJC9Q8WXX5 260 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ASB16Q96NS5 453 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 FAM83CQ9BQN1 747 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 SLC12A9Q9BXP2 914 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 MCOLN1Q9GZU1 580 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 WWOXQ9NZC7 414 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ZIM2Q9NZV7 527 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 OPTCQ9UBM4 332 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ST14Q9Y5Y6 855 aa14.52□□□□□ -0.08
ECHDC1-220ENST00000528402 ANKRD12Q6UB98 2062 aa14.52□□□□□ -0.09
ECHDC1-220ENST00000528402 EDDM13A0A1B0GTR0 161 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 GRXCR2A6NFK2 248 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 C16orf96A6NNT2 1141 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 K7EPI3 171 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 STK16O75716 305 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 OR4F21O95013 312 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 STAMBPO95630 424 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 NPPAP01160 153 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 MYOGP15173 224 aa14.51□□□□□ -0.09
ECHDC1-220ENST00000528402 EPB42P16452 691 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms