RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 GSTM4Q03013 218 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 KCNJ11Q14654 390 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PLCL1Q15111 1095 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 SYTL3Q4VX76 610 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 SNAP47Q5SQN1 464 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 METRNLQ641Q3 311 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 FAM83HQ6ZRV2 1179 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-215ENST00000528396 TMEM26Q6ZUK4 368 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PPIL6Q8IXY8 311 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 OR4D9Q8NGE8 314 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 CPT1BQ92523 772 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 LINC00615Q96LM1 132 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-215ENST00000528396 CCDC74BQ96LY2 380 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 ZNF778Q96MU6 729 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 CCM2Q9BSQ5 444 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 WWP1Q9H0M0 922 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 UCK1Q9HA47 277 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 SYBUQ9NX95 663 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 RNF14Q9UBS8 474 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PISDQ9UG56 409 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 LOXL2Q9Y4K0 774 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 PCDHGA8Q9Y5G5 932 aa13.12□□□□□ -0.31
CAPN1-215ENST00000528396 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 MAGEB16A2A368 324 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 SDR42E2A6NKP2 422 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 CD3EAPO15446 510 aaKnown RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 RRP8O43159 456 aaKnown RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 UBXN7O94888 489 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TNFSF15O95150 251 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 MLNP12872 115 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 BRAFP15056 766 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 MPSTP25325 297 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 PSMA3P25788 255 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 FOXN2P32314 431 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 MAGEA6P43360 314 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TTPAP49638 278 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 DR1Q01658 176 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ACVR1Q04771 509 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TRA2AQ13595 282 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 RPE65Q16518 533 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TBC1D25Q3MII6 688 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ANKRD22Q5VYY1 191 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TMEM71Q6P5X7 295 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 KLHL35Q6PF15 583 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 LRRC69Q6ZNQ3 347 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 CREG2Q8IUH2 290 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 C17orf53Q8N3J3 647 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ELMO1Q92556 727 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 FGF11Q92914 225 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ZNF578Q96N58 590 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 TBC1D10AQ9BXI6 508 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 SLC40A1Q9NP59 571 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 WDR70Q9NW82 654 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-215ENST00000528396 WDR37Q9Y2I8 494 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 HEBP2Q9Y5Z4 205 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
CAPN1-215ENST00000528396 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 C17orf113A0A1B0GUU1 675 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 SRRM3A6NNA2 597 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 CCDC188H7C350 402 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 AVILO75366 819 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 NDUFS3O75489 264 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 VAPBO95292 243 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MTHFD1P11586 935 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 TYRP1P17643 537 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 NMBRP28336 390 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 LIMK2P53671 638 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MAPK10P53779 464 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 PCBP4P57723 403 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 ERVPABLB-1P60509 514 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 ZFP36L1Q07352 338 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 PTK6Q13882 451 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 BOP1Q14137 746 aaKnown RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 GPR18Q14330 331 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 CLCA4Q14CN2 919 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MRNIPQ6NTE8 343 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 WDR74Q6RFH5 385 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 CES3Q6UWW8 571 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 PACS1Q6VY07 963 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 SYDE1Q6ZW31 735 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-215ENST00000528396 MICALCLQ6ZW33 695 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 SLITRK4Q8IW52 837 aa13.1□□□□□ -0.31
CAPN1-215ENST00000528396 AGBL5Q8NDL9 886 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms