RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SLC41A2Q96JW4 573 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PPM1MQ96MI6 270 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 VAT1Q99536 393 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 FAM118BQ9BPY3 351 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 RAB33BQ9H082 229 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 WWP1Q9H0M0 922 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 IMP3Q9NV31 184 aaKnown RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PADI1Q9ULC6 663 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PKP3Q9Y446 797 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PCDHA13Q9Y5I0 950 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 DNMT3AQ9Y6K1 912 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 MAST4O15021 2626 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 FLNCQ14315 2725 aa15.19■□□□□ 0.02
CLNS1A-210ENST00000528364 PIPSLA2A3N6 862 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 NTRK1P04629 796 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 POLBP06746 335 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 EBLN1P0CF75 366 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 MSH3P20585 1137 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 CASRP41180 1078 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 TNNT3P45378 269 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 ARCN1P48444 511 aaKnown RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 CRTC2Q53ET0 693 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 BBS12Q6ZW61 710 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 LILRA3Q8N6C8 439 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 SIDT2Q8NBJ9 832 aaKnown RBP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 OR4K2Q8NGD2 314 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 NRTNQ99748 197 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 FAM96AQ9H5X1 160 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 SEMA5BQ9P283 1151 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 TRHDEQ9UKU6 1024 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 RARRES3Q9UL19 164 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 TP53TG5Q9Y2B4 290 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 PCDHB3Q9Y5E6 796 aa15.18■□□□□ 0.02
CLNS1A-210ENST00000528364 SEC16AO15027 2179 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 MED13Q9UHV7 2174 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 GOLGA6L3A6NEY3 463 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 MGAT4DA6NG13 374 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 SGTAO43765 313 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 PRAMEF1O95521 474 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 CCNYL3P0C7X3 344 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 MTHFD1P11586 935 aaKnown RBP15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 LPOP22079 712 aaPredicted RBP15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 AKT1P31749 480 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ADRA1AP35348 466 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 XRCC4Q13426 336 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 TUBB3Q13509 450 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 DNASE1L3Q13609 305 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ITGA9Q13797 1035 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 SPARCL1Q14515 664 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 PLCL1Q15111 1095 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 RANBP10Q6VN20 620 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 DAAM2Q86T65 1068 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 UBXN4Q92575 508 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 C12orf66Q96MD2 445 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 FSD1LQ9BXM9 530 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 TWSG1Q9GZX9 223 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ASB8Q9H765 288 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 PDE7BQ9NP56 450 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 LHX9Q9NQ69 397 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 HRASLS2Q9NWW9 162 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 ANAPC2Q9UJX6 822 aa15.17■□□□□ 0.02
CLNS1A-210ENST00000528364 OR6C74A6NCV1 312 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 RCCD1A6NED2 376 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 OR5K3A6NET4 321 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 CCL22O00626 93 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 CREG1O75629 220 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 LCA5LO95447 670 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 PTMSP20962 102 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 PSMB4P28070 264 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 GEMP55040 296 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 RPS18P62269 152 aaKnown RBP15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 FOXK1P85037 733 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 TMPRSS15P98073 1019 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 XIAPP98170 497 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 OTUD4Q01804 1114 aaKnown RBP15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 TAF1AQ15573 450 aaPredicted RBP15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 GPR19Q15760 415 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 LONRF2Q1L5Z9 754 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 PRAMEF17Q5VTA0 474 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 AADACL2Q6P093 401 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 GBA3Q9H227 469 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 SMOXQ9NWM0 555 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 SLC24A2Q9UI40 661 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 KCND3Q9UK17 655 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 TLK1Q9UKI8 766 aa15.16■□□□□ 0.02
CLNS1A-210ENST00000528364 POLHQ9Y253 713 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms