RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 TMEM71Q6P5X7 295 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 CERS6Q6ZMG9 384 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 FAM83HQ6ZRV2 1179 aaPredicted RBP9.05□□□□□ -0.96
LINC00958-203ENST00000527945 CLEC14AQ86T13 490 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 TRAPPC5Q8IUR0 188 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 IGDCC3Q8IVU1 814 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 SLITRK4Q8IW52 837 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 NXPE1Q8N323 547 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 LILRA3Q8N6C8 439 aaPredicted RBP9.05□□□□□ -0.96
LINC00958-203ENST00000527945 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 LRRN4CLQ8ND94 238 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 MCUQ8NE86 351 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 OR10G6Q8NH81 332 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 SLC37A2Q8TED4 501 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 SNRNP27Q8WVK2 155 aaKnown RBP9.05□□□□□ -0.96
LINC00958-203ENST00000527945 HDAC10Q969S8 669 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 MFSD3Q96ES6 412 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 DCUN1D1Q96GG9 259 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 TTC1Q99614 292 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 SLC38A3Q99624 504 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 COPS8Q99627 209 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 CCM2Q9BSQ5 444 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 KIFC1Q9BW19 673 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 DPH1Q9BZG8 443 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 ASB8Q9H765 288 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 VPS37BQ9H9H4 285 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 KLC4Q9NSK0 619 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 KCNK4Q9NYG8 393 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 IL1RAPL1Q9NZN1 696 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
LINC00958-203ENST00000527945 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 KCNK6Q9Y257 313 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 PCDHB1Q9Y5F3 818 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 ZFYVE26Q68DK2 2539 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 UNC13CQ8NB66 2214 aa9.05□□□□□ -0.96
LINC00958-203ENST00000527945 URB1O60287 2271 aaKnown RBP9.05□□□□□ -0.96
LINC00958-203ENST00000527945 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 PRAMEF33A0A0G2JMD5 474 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 MGAT4DA6NG13 374 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 CDRT15L2A8MXV6 281 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 BHMG1C9JSJ3 638 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 CCDC188H7C350 402 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 NVLO15381 856 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 TOX3O15405 576 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 DUX1O43812 170 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 POP7O75817 140 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 AP2A2O94973 939 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ATP1B2P14415 290 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 BRAFP15056 766 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ACRV1P26436 265 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 CD82P27701 267 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 NDUFS1P28331 727 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ALDH4A1P30038 563 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 HALP42357 657 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 RPL21P46778 160 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ARCN1P48444 511 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 NPY2RP49146 381 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LMAN1P49257 510 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LIMK2P53671 638 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 PCBP4P57723 403 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 UBE2IP63279 158 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 SARNPP82979 210 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 DR1Q01658 176 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 PLOD1Q02809 727 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ITIH4Q14624 930 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 MAP9Q49MG5 647 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 METRNLQ641Q3 311 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 HIBCHQ6NVY1 386 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 DET1Q7L5Y6 550 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 RAB11FIP2Q7L804 512 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LDB1Q86U70 411 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 SERPINA9Q86WD7 417 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 PLXDC1Q8IUK5 500 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 UNC5BQ8IZJ1 945 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 Q8N9G6 341 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LSM14AQ8ND56 463 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ZNF248Q8NDW4 579 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 OR2L2Q8NH16 312 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 LKAAEAR1Q8TD35 194 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 GRK7Q8WTQ7 553 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ATXN7L3BQ96GX2 97 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 PRR11Q96HE9 360 aaPredicted RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 AHCYL2Q96HN2 611 aaKnown RBP9.04□□□□□ -0.96
LINC00958-203ENST00000527945 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 RAB33BQ9H082 229 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ASCL3Q9NQ33 180 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ZDHHC3Q9NYG2 299 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 RNF14Q9UBS8 474 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 CRLS1Q9UJA2 301 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 SOX13Q9UN79 622 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 HEBP2Q9Y5Z4 205 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
LINC00958-203ENST00000527945 ZCWPW2A0A1B0GU75 182 aa9.03□□□□□ -0.96
LINC00958-203ENST00000527945 A0A1W2PNU3 283 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms