RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CAPZBP47756 277 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 XIAPP98170 497 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 RPE65Q16518 533 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 PRSS42Q7Z5A4 293 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
CAPN1-207ENST00000527189 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 ACRBPQ8NEB7 543 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 OR2L2Q8NH16 312 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-207ENST00000527189 KLHL6Q8WZ60 621 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 EXTL1Q92935 676 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 KIAA1143Q96AT1 154 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-207ENST00000527189 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 CATSPER2Q96P56 530 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 TGM7Q96PF1 710 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
CAPN1-207ENST00000527189 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 ZNF891A8MT65 544 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-207ENST00000527189 PYCARD-AS1I3L0S3 204 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 PSMD3O43242 534 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 STK17BO94768 372 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
CAPN1-207ENST00000527189 LIFP15018 202 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 CDC25BP30305 580 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 AKT1P31749 480 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 CA5AP35218 305 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 GFERP55789 205 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 PTPRCAPQ14761 206 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 TBR1Q16650 682 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 BCL7AQ4VC05 210 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-207ENST00000527189 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-207ENST00000527189 TMEM139Q8IV31 216 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 ESX1Q8N693 406 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 UBXN4Q92575 508 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 CTRCQ99895 268 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 APMAPQ9HDC9 416 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 DOPEY2Q9Y3R5 2298 aa13.12□□□□□ -0.31
CAPN1-207ENST00000527189 C17orf113A0A1B0GUU1 675 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CFAP99D6REC4 459 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 H7C0S8 307 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 GPR39O43194 453 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 RASSF9O75901 435 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 DLGAP3O95886 979 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 FGF5P12034 268 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 ITGALP20701 1170 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 STIP1P31948 543 aaKnown RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 LEPRP48357 1165 aaKnown RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 ZNF140P52738 457 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 MC1RQ01726 317 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 FOXM1Q08050 763 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 NFE2L1Q14494 772 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 P3H1Q32P28 736 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 KCTD11Q693B1 232 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 AADACL2Q6P093 401 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 TIPARPQ7Z3E1 657 aaKnown RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 RSC1A1Q92681 617 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 DCUN1D1Q96GG9 259 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CD180Q99467 661 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 APOL2Q9BQE5 337 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CCM2Q9BSQ5 444 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CLMPQ9H6B4 373 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 LRRC40Q9H9A6 602 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 GPN2Q9H9Y4 310 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 STARD5Q9NSY2 213 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
CAPN1-207ENST00000527189 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 CRLS1Q9UJA2 301 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 KCTD3Q9Y597 815 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
CAPN1-207ENST00000527189 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 DDX3YO15523 660 aaKnown RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 LDB2O43679 373 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 GSTM1P09488 218 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 MTHFD1P11586 935 aaKnown RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 ATP1B2P14415 290 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 NELFEP18615 380 aaKnown RBP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 NDUFS1P28331 727 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 CYP4F2P78329 520 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 GSTM4Q03013 218 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 SRSF1Q07955 248 aaKnown RBP eCLIP13.1□□□□□ -0.31
CAPN1-207ENST00000527189 IRGCQ6NXR0 463 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 BORAQ6PGQ7 559 aa13.1□□□□□ -0.31
CAPN1-207ENST00000527189 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms