RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	THG1L	Q9NWX6	298 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	LIMD1	Q9UGP4	676 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	INTS6	Q9UL03	887 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TPRKB	Q9Y3C4	175 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PLXNB2	O15031	1838 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	BCKDK	O14874	412 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ANGPTL1	O95841	491 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ITGAM	P11215	1152 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PRDX3	P30048	256 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ST13	P50502	369 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PPP5C	P53041	499 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MVK	Q03426	396 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PIGF	Q07326	219 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC10A7	Q0GE19	358 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	SELPLG	Q14242	412 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ADPRM	Q3LIE5	342 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARTN	Q5T4W7	220 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TWF2	Q6IBS0	349 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	LAIR2	Q6ISS4	152 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MSANTD2	Q6P1R3	559 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PAQR3	Q6TCH7	311 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	HIPK1	Q86Z02	1210 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARMC8	Q8IUR7	673 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	SVOP	Q8N4V2	548 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TEX26	Q8N6G2	289 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR6J1	Q8NGC5	347 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	FBXO30	Q8TB52	745 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	NDNF	Q8TB73	568 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	DYNC2LI1	Q8TCX1	351 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MCOLN3	Q8TDD5	553 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	REXO5	Q96IC2	774 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	C1orf74	Q96LT6	269 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZFP42	Q96MM3	310 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF583	Q96ND8	569 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ELP3	Q9H9T3	547 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ADGRE2	Q9UHX3	823 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF229	Q9UJW7	825 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	KCTD3	Q9Y597	815 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	HS3ST4	Q9Y661	456 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	HSPE1-MOB4	S4R3N1	261 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	BRCA1	P38398	1863 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	UBA6	A0AVT1	1052 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	MRPS14	O60783	128 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SCEL	O95171	688 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SEC24A	O95486	1093 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CYP11A1	P05108	521 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SMIM10L2A	P0DMW4	78 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SMIM10L2B	P0DMW5	78 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	PTPN2	P17706	415 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ACVR2A	P27037	513 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	IST1	P53990	364 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CXCR4	P61073	352 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDK5R2	Q13319	367 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	PGS1	Q32NB8	556 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	INAVA	Q3KP66	663 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	DUSP28	Q4G0W2	176 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CYP20A1	Q6UW02	462 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ENPP6	Q6UWR7	440 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC22A16	Q86VW1	577 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	LGI2	Q8N0V4	545 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CHCHD4	Q8N4Q1	142 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARL10	Q8N8L6	244 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	BRSK1	Q8TDC3	778 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	BLOC1S5	Q8TDH9	187 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	DACH2	Q96NX9	599 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ACOX2	Q99424	681 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	NOL6	Q9H6R4	1146 aa	Known RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	CCNB1IP1	Q9NPC3	277 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SACM1L	Q9NTJ5	587 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SCN3B	Q9NY72	215 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF225	Q9UK10	706 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	LTBP3	Q9NS15	1303 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	DOCK4	Q8N1I0	1966 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SAGE2P	A6NJ88	616 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	BTN3A1	O00481	513 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	MOCS2	O96007	188 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	EPO	P01588	193 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	RET	P07949	1114 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	JUND	P17535	347 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	MLLT6	P55198	1093 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	TPTE	P56180	551 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL5RA	Q01344	420 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SEMA3A	Q14563	771 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	PLA2G4E	Q3MJ16	856 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SYT6	Q5T7P8	510 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	UGT3A1	Q6NUS8	523 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	SCIMP	Q6UWF3	145 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	GALNT13	Q8IUC8	556 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAM86B1	Q8N7N1	296 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	DNAJB3	Q8WWF6	145 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAM162A	Q96A26	154 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	YIPF6	Q96EC8	236 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	HMCES	Q96FZ2	354 aa		10.12	□□□□□ -0.79
SPIDR-225	ENST00000524141	TXNDC15	Q96J42	360 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms