RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 DET1Q7L5Y6 550 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 RFX6Q8HWS3 928 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 SLC38A9Q8NBW4 561 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 NAT14Q8WUY8 206 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 MLXIPLQ9NP71 852 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 UVRAGQ9P2Y5 699 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 SNX7Q9UNH6 387 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 OR6C74A6NCV1 312 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 OR5K3A6NET4 321 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 TCP11X1B4DZS4 312 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 PPP1R12AO14974 1030 aaPredicted RBP25.31■■□□□ 1.64
PVT1-219ENST00000523427 H2AFZP0C0S5 128 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 COL8A1P27658 744 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 TUBB4BP68371 445 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 TUBB2AQ13885 445 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 LCN10Q6JVE6 187 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 H2AFVQ71UI9 128 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 OOSP2Q86WS3 158 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 KMT5CQ86Y97 462 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 D2HGDHQ8N465 521 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 BEND7Q8N7W2 519 aaPredicted RBP25.31■■□□□ 1.64
PVT1-219ENST00000523427 ENDOVQ8N8Q3 282 aaKnown RBP25.31■■□□□ 1.64
PVT1-219ENST00000523427 CTNNBL1Q8WYA6 563 aaPredicted RBP25.31■■□□□ 1.64
PVT1-219ENST00000523427 TADA1Q96BN2 335 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 SRPK1Q96SB4 655 aaKnown RBP25.31■■□□□ 1.64
PVT1-219ENST00000523427 CD180Q99467 661 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 TUBB2BQ9BVA1 445 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 WWP1Q9H0M0 922 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 ZNF451Q9Y4E5 1061 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 CENPEQ02224 2701 aa25.31■■□□□ 1.64
PVT1-219ENST00000523427 SHANK1Q9Y566 2161 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 A0A0A6YYK5 440 aaPredicted RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 KCNJ13O60928 360 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 MBD3O95983 291 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 MTHFD1P11586 935 aaKnown RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 TNNT1P13805 278 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 RAPSNQ13702 412 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 LAMB3Q13751 1172 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 FNBP1LQ5T0N5 605 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 TMTC4Q5T4D3 741 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 SLC9A4Q6AI14 798 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 JMJD6Q6NYC1 403 aaPredicted RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 FDCSPQ8NFU4 85 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 RNF25Q96BH1 459 aaPredicted RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 C12orf66Q96MD2 445 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 INSM2Q96T92 566 aaPredicted RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 TLR10Q9BXR5 811 aa25.3■■□□□ 1.64
PVT1-219ENST00000523427 ZCCHC2Q9C0B9 1178 aaKnown RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 LUC7L2Q9Y383 392 aaKnown RBP25.3■■□□□ 1.64
PVT1-219ENST00000523427 CACNA1DQ01668 2161 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 TMEM63AO94886 807 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 LCA5LO95447 670 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 ZBTB11O95625 1053 aaPredicted RBP25.29■■□□□ 1.64
PVT1-219ENST00000523427 ATXN8OSP0DMR3 200 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 AKT1P31749 480 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 HMGCLP35914 325 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 SPAM1P38567 509 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 CHRNA4P43681 627 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 FANCCQ00597 558 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 DMPKQ09013 629 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 TEX44Q53QW1 395 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 LDLRAP1Q5SW96 308 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 GPRC6AQ5T6X5 926 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 SPDYE1Q8NFV5 336 aaPredicted RBP25.29■■□□□ 1.64
PVT1-219ENST00000523427 BLOC1S5Q8TDH9 187 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 ZNF501Q96CX3 271 aaPredicted RBP25.29■■□□□ 1.64
PVT1-219ENST00000523427 CLIP3Q96DZ5 547 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 CAPN11Q9UMQ6 739 aa25.29■■□□□ 1.64
PVT1-219ENST00000523427 G3BP2Q9UN86 482 aaKnown RBP25.29■■□□□ 1.64
PVT1-219ENST00000523427 GLYATL1P3A0A0U1RQE8 302 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 MEN1O00255 615 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 DPM1O60762 260 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 KRT1P04264 644 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 POLR2CP19387 275 aaPredicted RBP25.28■■□□□ 1.64
PVT1-219ENST00000523427 LPOP22079 712 aaPredicted RBP25.28■■□□□ 1.64
PVT1-219ENST00000523427 WNT3AP56704 352 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 ODF2Q5BJF6 829 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 ZNF787Q6DD87 383 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 Q8NA96 180 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 OLFM3Q96PB7 478 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 NUDT9Q9BW91 350 aa25.28■■□□□ 1.64
PVT1-219ENST00000523427 CUEDC1Q9NWM3 386 aaPredicted RBP25.28■■□□□ 1.64
PVT1-219ENST00000523427 KRT86O43790 486 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 POLBP06746 335 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 PTPN3P26045 913 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 TNNT3P45378 269 aaPredicted RBP25.27■■□□□ 1.64
PVT1-219ENST00000523427 KPNA2P52292 529 aaKnown RBP25.27■■□□□ 1.64
PVT1-219ENST00000523427 UBASH3AP57075 661 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 KRT33BQ14525 404 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 GSE1Q14687 1217 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 IQCB1Q15051 598 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 LLGL1Q15334 1064 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 SIRPB2Q5JXA9 342 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 PLEKHS1Q5SXH7 462 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 IZUMO3Q5VZ72 239 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 PAPD7Q5XG87 772 aaKnown RBP25.27■■□□□ 1.64
PVT1-219ENST00000523427 SLC29A3Q9BZD2 475 aa25.27■■□□□ 1.64
PVT1-219ENST00000523427 XPO4Q9C0E2 1151 aaKnown RBP25.27■■□□□ 1.64
PVT1-219ENST00000523427 SAE1Q9UBE0 346 aaPredicted RBP25.27■■□□□ 1.64
PVT1-219ENST00000523427 FAM153AQ9UHL3 310 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms