RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 DCLRE1AQ6PJP8 1040 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 CCDC91Q7Z6B0 441 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 SLFN11Q7Z7L1 901 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 GLRX5Q86SX6 157 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 AACSQ86V21 672 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 ZDHHC17Q8IUH5 632 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 ARID3BQ8IVW6 561 aaPredicted RBP4.84□□□□□ -1.63
SKP1-211ENST00000523359 CEP97Q8IW35 865 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 IPMKQ8NFU5 416 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 MAGEC3Q8TD91 643 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 DUSP19Q8WTR2 217 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 ZNF75CPQ92670 426 aaPredicted RBP4.84□□□□□ -1.63
SKP1-211ENST00000523359 MOAP1Q96BY2 351 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 MED30Q96HR3 178 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 THOC3Q96J01 351 aaKnown RBP4.84□□□□□ -1.63
SKP1-211ENST00000523359 GSDMAQ96QA5 445 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 SMC6Q96SB8 1091 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 C1QTNF1Q9BXJ1 281 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 SMARCAL1Q9NZC9 954 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 FBXL5Q9UKA1 691 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 FBXL2Q9UKC9 423 aa4.84□□□□□ -1.63
SKP1-211ENST00000523359 PTRH2Q9Y3E5 179 aaKnown RBP4.84□□□□□ -1.63
SKP1-211ENST00000523359 DOCK7Q96N67 2140 aa4.84□□□□□ -1.64
SKP1-211ENST00000523359 PDS5AQ29RF7 1337 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 FAM90A26D6RGX4 464 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 MAP2K7O14733 419 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 CASQ2O14958 399 aaPredicted RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 KCNN4O15554 427 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 ENTPD3O75355 529 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 SEC22BO75396 215 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PALMO75781 387 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 CSPG5O95196 566 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PAPSS2O95340 614 aaPredicted RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 ZBTB11O95625 1053 aaPredicted RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 PMS2P2O95744 297 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PCP11498 1178 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 GZMAP12544 262 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 CORO1AP31146 461 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 HSPA4P34932 840 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 TCF7P36402 384 aaPredicted RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 SUOXP51687 545 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 STARD6P59095 220 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 ZXDBP98169 803 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PDE1BQ01064 536 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 TNFAIP1Q13829 316 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 KCNC3Q14003 757 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 DLG2Q15700 870 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 KYNUQ16719 465 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 C18orf63Q68DL7 685 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PAPD4Q6PIY7 484 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 BRAT1Q6PJG6 821 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 GPR180Q86V85 440 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 KBTBD6Q86V97 674 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 LINC00346Q8IVM7 164 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 RASGEF1CQ8N431 466 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 IL17RCQ8NAC3 791 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 OR5R1Q8NH85 324 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 ITFG2Q969R8 447 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 ADGRG7Q96K78 797 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 CCDC43Q96MW1 224 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 ATP6V0BQ99437 205 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 PAFAH2Q99487 392 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 TM6SF1Q9BZW5 370 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 GAREM1Q9H706 876 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 LIN28AQ9H9Z2 209 aaKnown RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 ADPRHL2Q9NX46 363 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 WSB2Q9NYS7 404 aaPredicted RBP4.83□□□□□ -1.64
SKP1-211ENST00000523359 ZNF224Q9NZL3 707 aa4.83□□□□□ -1.64
SKP1-211ENST00000523359 A0A0B4J203 849 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 LRRC72A6NJI9 287 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SH2B2O14492 632 aaPredicted RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 ANKRD28O15084 1053 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 PAPSS1O43252 624 aaPredicted RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 SNX4O95219 450 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SNRNP70P08621 437 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 T-ENOLP0DO92 83 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 MMP9P14780 707 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 HLA-DPA1P20036 260 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 S1PR1P21453 382 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SAT1P21673 171 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 UGT1A1P22309 533 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 NNMTP40261 264 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 TMPOP42166 694 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 GPC3P51654 580 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 ZNF41P51814 821 aaPredicted RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 PCLAFQ15004 111 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SF3B4Q15427 424 aaKnown RBP eCLIP4.82□□□□□ -1.64
SKP1-211ENST00000523359 LCN10Q6JVE6 187 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 FIP1L1Q6UN15 594 aaKnown RBP4.82□□□□□ -1.64
SKP1-211ENST00000523359 RUFY3Q7L099 469 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 TMEM110Q86TL2 294 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 ODF3L1Q8IXM7 274 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 CCDC170Q8IYT3 715 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SCML4Q8N228 414 aa4.82□□□□□ -1.64
SKP1-211ENST00000523359 SPC24Q8NBT2 197 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms