RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 WIPF3A6NGB9 483 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 ENO4A6NNW6 628 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 SMTNL1A8MU46 457 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 GPR39O43194 453 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 TMEM63AO94886 807 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 ZBTB11O95625 1053 aaPredicted RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 RAB40ALP0C0E4 278 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 MTHFD1P11586 935 aaKnown RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 COL8A1P27658 744 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 GSDMDP57764 484 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 NFKBIBQ15653 356 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 PRAMEF17Q5VTA0 474 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 FAM69BQ5VUD6 431 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 DSELQ8IZU8 1212 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 ENDOVQ8N8Q3 282 aaKnown RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 PPM1MQ96MI6 270 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 GLOD4Q9HC38 313 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 IMP3Q9NV31 184 aaKnown RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 CTTNBP2NLQ9P2B4 639 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 TCFL5Q9UL49 500 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 SNX7Q9UNH6 387 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 BTRCQ9Y297 605 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 CFAP20Q9Y6A4 193 aaKnown RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 DNMT3AQ9Y6K1 912 aaPredicted RBP22.18■■□□□ 1.14
PVT1-218ENST00000523328 ZNF487B1APH4 448 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 MEN1O00255 615 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A9O60656 530 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 CLDN1O95832 211 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 KLK3P07288 261 aaPredicted RBP22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A6P19224 532 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A1P22309 533 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A4P22310 534 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 ITGA1P56199 1179 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 PDK1Q15118 436 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 ZFYVE27Q5T4F4 411 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 METRNLQ641Q3 311 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 CCDC70Q6NSX1 233 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 TMEM220Q6QAJ8 160 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 MAMDC2Q7Z304 686 aaPredicted RBP22.17■■□□□ 1.14
PVT1-218ENST00000523328 OOSP2Q86WS3 158 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 HPS6Q86YV9 775 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 RHOT1Q8IXI2 618 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 TTC30BQ8N4P2 665 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 DDHD1Q8NEL9 900 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 PRR7Q8TB68 274 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 PNPLA2Q96AD5 504 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 INSM2Q96T92 566 aaPredicted RBP22.17■■□□□ 1.14
PVT1-218ENST00000523328 NLNQ9BYT8 704 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 SLC29A3Q9BZD2 475 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 ZCCHC2Q9C0B9 1178 aaKnown RBP22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A7Q9HAW7 530 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A10Q9HAW8 530 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UGT1A8Q9HAW9 530 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 UVRAGQ9P2Y5 699 aa22.17■■□□□ 1.14
PVT1-218ENST00000523328 C3orf70A6NLC5 250 aaPredicted RBP22.16■■□□□ 1.14
PVT1-218ENST00000523328 OR2AG2A6NM03 316 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 ZNF185O15231 689 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 PMPCBO75439 489 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 CAPN1P07384 714 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 VARSP26640 1264 aaKnown RBP22.16■■□□□ 1.14
PVT1-218ENST00000523328 RORAP35398 523 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 PBX1P40424 430 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 KPNA2P52292 529 aaKnown RBP22.16■■□□□ 1.14
PVT1-218ENST00000523328 ABRQ12979 859 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 NOMO1Q15155 1222 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 TEX44Q53QW1 395 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 LDLRAP1Q5SW96 308 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 TMTC4Q5T4D3 741 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 DUS1LQ6P1R4 473 aaKnown RBP22.16■■□□□ 1.14
PVT1-218ENST00000523328 FBXO38Q6PIJ6 1188 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 NPNTQ6UXI9 565 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 B4GALNT4Q76KP1 1039 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 CARFQ8N187 725 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 GLIS1Q8NBF1 620 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 TCTN2Q96GX1 697 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 UBP1Q9NZI7 540 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 IL17CQ9P0M4 197 aa22.16■■□□□ 1.14
PVT1-218ENST00000523328 ERRFI1Q9UJM3 462 aaPredicted RBP22.16■■□□□ 1.14
PVT1-218ENST00000523328 FER1L5A0AVI2 2057 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 LRRD1A4D1F6 860 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 GAPDHSO14556 408 aaPredicted RBP22.15■■□□□ 1.14
PVT1-218ENST00000523328 LDLRP01130 860 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 SPAM1P38567 509 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 DCTP40126 519 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 VAV2P52735 878 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 XRCC4Q13426 336 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 ZDHHC20Q5W0Z9 365 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 FAM198BQ6UWH4 519 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 FAM151BQ6UXP7 276 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 TMEM102Q8N9M5 508 aaPredicted RBP22.15■■□□□ 1.14
PVT1-218ENST00000523328 ZFPM2Q8WW38 1151 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 CPT1BQ92523 772 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 C19orf60Q96EN9 201 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 SMAD5Q99717 465 aaKnown RBP22.15■■□□□ 1.14
PVT1-218ENST00000523328 TLR10Q9BXR5 811 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 TRABDQ9H4I3 376 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 SLC24A2Q9UI40 661 aa22.15■■□□□ 1.14
PVT1-218ENST00000523328 CCDC88CQ9P219 2028 aa22.14■■□□□ 1.14
PVT1-218ENST00000523328 A0A0A6YYK5 440 aaPredicted RBP22.14■■□□□ 1.13
PVT1-218ENST00000523328 LOC285095A0A1B0GVY8 99 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms