RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TGM7Q96PF1 710 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 TMEM121Q9BTD3 319 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 SLC12A9Q9BXP2 914 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 RAB33BQ9H082 229 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF768Q9H5H4 540 aaKnown RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 FAM96AQ9H5X1 160 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 EPHA6Q9UF33 1036 aa12.12□□□□□ -0.47
VEGFA-223ENST00000523125 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-223ENST00000523125 BSNQ9UPA5 3926 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 TRBV5-4A0A0C4DH59 114 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 RAD1O60671 282 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 ITGB2P05107 769 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 TPH1P17752 444 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 CDKN1CP49918 316 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 ATP1A2P50993 1020 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 PPP1CAP62136 330 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 SH3BP2P78314 561 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 PRSS42Q7Z5A4 293 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 NXPE1Q8N323 547 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 TXLNBQ8N3L3 684 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 ATG4AQ8WYN0 398 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 KLHL6Q8WZ60 621 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 EXTL1Q92935 676 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 LINC00615Q96LM1 132 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 INSM2Q96T92 566 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 ZPBPQ9BS86 351 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 SEMA5BQ9P283 1151 aa12.11□□□□□ -0.47
VEGFA-223ENST00000523125 CFAP20Q9Y6A4 193 aaKnown RBP12.11□□□□□ -0.47
VEGFA-223ENST00000523125 IGLV3-16A0A075B6K0 115 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 LOC101059948A0A1B0GTJ6 334 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 H7C0S8 307 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 POLR1CO15160 346 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 STK17BO94768 372 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 AP2A1O95782 977 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 DLGAP3O95886 979 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 PSMA3P25788 255 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 HADHAP40939 763 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 SEPHS1P49903 392 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 OASLQ15646 514 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 TBR1Q16650 682 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 DUS1LQ6P1R4 473 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 FAM92BQ6ZTR7 304 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 SNX20Q7Z614 316 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 TAB3Q8N5C8 712 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 ZSCAN1Q8NBB4 408 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 ULK4Q96C45 1275 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 NLE1Q9NVX2 485 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
VEGFA-223ENST00000523125 ACSL5Q9ULC5 683 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 SPTBP11277 2137 aa12.1□□□□□ -0.47
VEGFA-223ENST00000523125 IGHV5-51A0A0C4DH38 117 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 KLHL33A6NCF5 533 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 MROH6A6NGR9 719 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 LIASO43766 372 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 SNRNP200O75643 2136 aaKnown RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 ZNF28P17035 718 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 ITGALP20701 1170 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 MAP4P27816 1152 aaKnown RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 MC4RP32245 332 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 PRLHRP49683 370 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 FOXM1Q08050 763 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 POU6F1Q14863 301 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 P3H1Q32P28 736 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 GPR33Q49SQ1 333 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 IRGCQ6NXR0 463 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 PIANPQ8IYJ0 282 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 CFAP206Q8IYR0 622 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 UNC5BQ8IZJ1 945 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 RNF31Q96EP0 1072 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 ZDHHC12Q96GR4 267 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 CDKN2AIPNLQ96HQ2 116 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 COPS8Q99627 209 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 ZDHHC3Q9NYG2 299 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 CRLS1Q9UJA2 301 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 GUCA1BQ9UMX6 200 aa12.09□□□□□ -0.47
VEGFA-223ENST00000523125 TLN1Q9Y490 2541 aaKnown RBP12.09□□□□□ -0.47
VEGFA-223ENST00000523125 C17orf113A0A1B0GUU1 675 aa12.08□□□□□ -0.48
VEGFA-223ENST00000523125 PSMD3O43242 534 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms