RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PCID2Q5JVF3 399 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 LRRC8BQ6P9F7 803 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 CCDC137Q6PK04 289 aaKnown RBP16.06■□□□□ 0.16
PABPC1-221ENST00000522720 XKR5Q6UX68 686 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 CLEC14AQ86T13 490 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
PABPC1-221ENST00000522720 NCSTNQ92542 709 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 CXorf40BQ96DE9 158 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 SGSM3Q96HU1 749 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 CCDC74BQ96LY2 380 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 CHRAC1Q9NRG0 131 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 BFARQ9NZS9 450 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 AKAP7Q9P0M2 348 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-221ENST00000522720 TMEM9Q9P0T7 183 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 PSMD13Q9UNM6 376 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 NEU2Q9Y3R4 380 aa16.06■□□□□ 0.16
PABPC1-221ENST00000522720 PRAMEF33A0A0G2JMD5 474 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 GOLGA6L10A0A0M3HER8 536 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 TCRBV7S3A2A0A539 114 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 RRP8O43159 456 aaKnown RBP16.05■□□□□ 0.16
PABPC1-221ENST00000522720 AP2A2O94973 939 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 GOT2P00505 430 aaKnown RBP16.05■□□□□ 0.16
PABPC1-221ENST00000522720 JMJD7P0C870 316 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 MPSTP25325 297 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 PPM1FP49593 454 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-221ENST00000522720 VPS41P49754 854 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 PCBP4P57723 403 aaKnown RBP16.05■□□□□ 0.16
PABPC1-221ENST00000522720 GNG11P61952 73 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 KCNJ11Q14654 390 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 LYPLAL1Q5VWZ2 237 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 AFTPHQ6ULP2 937 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 CFAP206Q8IYR0 622 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 CLDN19Q8N6F1 224 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 RCBTB1Q8NDN9 531 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 OR6P1Q8NGX9 317 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 OR4L1Q8NH43 312 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 HM13Q8TCT9 377 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.05■□□□□ 0.16
PABPC1-221ENST00000522720 IL22Q9GZX6 179 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 VPS37BQ9H9H4 285 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 PISDQ9UG56 409 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 PCDHGA7Q9Y5G6 932 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 ZFHX4Q86UP3 3567 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 CFAP47Q6ZTR5 3102 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 PTPRQQ9UMZ3 2332 aa16.05■□□□□ 0.16
PABPC1-221ENST00000522720 ADAMTS20P59510 1910 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 PHF2O75151 1096 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 UBXN7O94888 489 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 ITIH1P19827 911 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 NSG1P42857 185 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 MAPK9P45984 424 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 FNTAP49354 379 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 PRAMEP78395 509 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 CRADDP78560 199 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 SARNPP82979 210 aaKnown RBP16.04■□□□□ 0.16
PABPC1-221ENST00000522720 GPR18Q14330 331 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 PAPD7Q5XG87 772 aaKnown RBP16.04■□□□□ 0.16
PABPC1-221ENST00000522720 PACS1Q6VY07 963 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 CERS6Q6ZMG9 384 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 ZNF534Q76KX8 674 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 ZNF248Q8NDW4 579 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 HNRNPLLQ8WVV9 542 aaKnown RBP16.04■□□□□ 0.16
PABPC1-221ENST00000522720 INSM2Q96T92 566 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-221ENST00000522720 TTC1Q99614 292 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 CCM2Q9BSQ5 444 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 WWP1Q9H0M0 922 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 OGFRQ9NZT2 677 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 ZFYVE26Q68DK2 2539 aa16.04■□□□□ 0.16
PABPC1-221ENST00000522720 FAM208BQ5VWN6 2430 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 AGRPO00253 132 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 NVLO15381 856 aaKnown RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 POLBP06746 335 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 GSTM1P09488 218 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 SLC35G4P0C7Q5 338 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 MTHFD1P11586 935 aaKnown RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 TYRP1P17643 537 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 AMD1P17707 334 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 MGAT1P26572 445 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 GSTM4Q03013 218 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 ZNF658BQ4V348 819 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 CAPRIN2Q6IMN6 1127 aaKnown RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 PLXDC1Q8IUK5 500 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 LILRA3Q8N6C8 439 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 AGBL5Q8NDL9 886 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 ZFPM2Q8WW38 1151 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 CPT1BQ92523 772 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 KIFC1Q9BW19 673 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 TREX1Q9NSU2 369 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 IMP3Q9NV31 184 aaKnown RBP16.03■□□□□ 0.16
PABPC1-221ENST00000522720 FAM8A1Q9UBU6 413 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 ITPR1Q14643 2758 aa16.03■□□□□ 0.16
PABPC1-221ENST00000522720 MN1Q10571 1320 aaPredicted RBP16.02■□□□□ 0.16
PABPC1-221ENST00000522720 QSOX1O00391 747 aa16.02■□□□□ 0.16
PABPC1-221ENST00000522720 CCL4P13236 92 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms