RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TPRKB	Q9Y3C4	175 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	DUXA	A6NLW8	204 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	INSIG1	O15503	277 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	NBN	O60934	754 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	SERPINA3	P01011	423 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	HGF	P14210	728 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	SSTR1	P30872	391 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	ARHGDIB	P52566	201 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	PRKAG1	P54619	331 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	ARSF	P54793	590 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	PTPN5	P54829	565 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	RCAN2	Q14206	197 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	KHDC1	Q4VXA5	237 aa	Known RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	FGD3	Q5JSP0	725 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	CCNYL2	Q5T2Q4	361 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	FAM126B	Q8IXS8	530 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	DQX1	Q8TE96	717 aa	Known RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	KLHL32	Q96NJ5	620 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	USB1	Q9BQ65	265 aa	Known RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	CLSTN3	Q9BQT9	956 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	PIGU	Q9H490	435 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	LRRC19	Q9H756	370 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	MOV10	Q9HCE1	1003 aa	Known RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	ABCB8	Q9NUT2	735 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	PRPF19	Q9UMS4	504 aa	Known RBP	10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	TLR6	Q9Y2C9	796 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	ROBO3	Q96MS0	1386 aa		10.22	□□□□□ -0.77
TCF7-223	ENST00000522653	FAM86C2P	A6NEL3	165 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	OR2AG2	A6NM03	316 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	PABPC4L	P0CB38	370 aa	Known RBP	10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	NTSR1	P30989	418 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	L1CAM	P32004	1257 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	SHMT2	P34897	504 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	NSG1	P42857	185 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CLCNKB	P51801	687 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	PIK3R6	Q5UE93	754 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ZNF621	Q6ZSS3	439 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	FAM228A	Q86W67	206 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ACTL9	Q8TC94	416 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ZSWIM3	Q96MP5	696 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	SEMA6A	Q9H2E6	1030 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	MIOS	Q9NXC5	875 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CYP8B1	Q9UNU6	501 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	PCDHGB1	Q9Y5G3	927 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	MYO5B	Q9ULV0	1848 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CAMTA1	Q9Y6Y1	1673 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	AKAP3	O75969	853 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ERCC2	P18074	760 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	LBP	P18428	481 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	EPOR	P19235	508 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CBX5	P45973	191 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CLCN7	P51798	805 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	TEAD2	Q15562	447 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	MAPK14	Q16539	360 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CCL14	Q16627	93 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	GPR107	Q5VW38	600 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	RINL	Q6ZS11	566 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	SFRP1	Q8N474	314 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	PRELID2	Q8N945	189 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ZBTB45	Q96K62	511 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	CDC6	Q99741	560 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	SERHL2	Q9H4I8	314 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	USP29	Q9HBJ7	922 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	TRIM39	Q9HCM9	518 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	SERHL	Q9NQF3	203 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	NUDT4	Q9NZJ9	180 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	NUDT5	Q9UKK9	219 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	ACSL5	Q9ULC5	683 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	LRRC42	Q9Y546	428 aa		10.21	□□□□□ -0.77
TCF7-223	ENST00000522653	LINC00854	A0A1B0GVQ3	168 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	CPN2	P22792	545 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	MAT2A	P31153	395 aa	Known RBP	10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	SOX11	P35716	441 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	ARFIP1	P53367	373 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	MBTD1	Q05BQ5	628 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	FAAP100	Q0VG06	881 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	PRKG2	Q13237	762 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	KLHL12	Q53G59	568 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	AGK	Q53H12	422 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	MANEA	Q5SRI9	462 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	MLIP	Q5VWP3	458 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	DEFB123	Q8N688	67 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	VGLL2	Q8N8G2	317 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	ATG16L2	Q8NAA4	619 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	PDPR	Q8NCN5	879 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	SLC22A8	Q8TCC7	542 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	GAL3ST4	Q96RP7	486 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	STON1	Q9Y6Q2	735 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	SNAP91	O60641	907 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	CSF2RA	P15509	400 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	CTPS1	P17812	591 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	CASP4	P49662	377 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	MYBPC1	Q00872	1141 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	PLP2	Q04941	152 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	VAC14	Q08AM6	782 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	DPYS	Q14117	519 aa		10.21	□□□□□ -0.78
TCF7-223	ENST00000522653	LCN1P1	Q5VSP4	162 aa		10.21	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms