RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 STMN1P16949 149 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CPT1AP50416 773 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RGS1Q08116 209 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 BTN1A1Q13410 526 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 HSDL1Q3SXM5 330 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 TIGD3Q6B0B8 471 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 LAIR1Q6GTX8 287 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 FSTL4Q6MZW2 842 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 CNSTQ6PJW8 725 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 HDDC2Q7Z4H3 204 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 NLRP8Q86W28 1048 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ACVR1CQ8NER5 493 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 WDR48Q8TAF3 677 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 RDH11Q8TC12 318 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 BLOC1S5Q8TDH9 187 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ARNTL2Q8WYA1 636 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 MAGEB10Q96LZ2 347 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 DUSP21Q9H596 190 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 APOBEC3GQ9HC16 384 aaKnown RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ACOT13Q9NPJ3 140 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 KLHL21Q9UJP4 597 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 TLK1Q9UKI8 766 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 ELF5Q9UKW6 265 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 PEX16Q9Y5Y5 336 aa11.9□□□□□ -0.5
SPIDR-217ENST00000522117 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.5
SPIDR-217ENST00000522117 IGLV3-22A0A075B6J6 115 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PSMD10O75832 226 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 ENDOD1O94919 500 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 FADS2O95864 444 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PRKAR1BP31321 381 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SLC35A2P78381 396 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CUL2Q13617 745 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 ZNF273Q14593 569 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 RBM20Q5T481 1227 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 DBX2Q6ZNG2 339 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PTRH1Q86Y79 214 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 OR8H2Q8N162 312 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 WDTC1Q8N5D0 677 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 OR8H1Q8NGG4 311 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 DNAJA4Q8WW22 397 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 KLHL6Q8WZ60 621 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TEKT5Q96M29 485 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TRNT1Q96Q11 434 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CPNE1Q99829 537 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 FBXO10Q9UK96 956 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CNTN6Q9UQ52 1028 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 RPH3AQ9Y2J0 694 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 MFHAS1Q9Y4C4 1052 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 DAGLAQ9Y4D2 1042 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PCDHA9Q9Y5H5 950 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 BCLAF3A2AJT9 711 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 ANGPT2O15123 496 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SULT1B1O43704 296 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 MYL3P08590 195 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SFTPCP11686 197 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CHRM3P20309 590 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CHMP24386 653 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 GSK3BP49841 420 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PTCHD3Q3KNS1 767 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 UGT3A2Q3SY77 523 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 Q3ZCU0 254 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 FBXO43Q4G163 708 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 CACHD1Q5VU97 1274 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TIGD7Q6NT04 549 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TLK2Q86UE8 772 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 COMMD7Q86VX2 200 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TMC8Q8IU68 726 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 GPALPP1Q8IXQ4 340 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 EMC1Q8N766 993 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 AMER2Q8N7J2 671 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 ST8SIA4Q92187 359 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PTERQ96BW5 349 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 PDLIM5Q96HC4 596 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SERINC2Q96SA4 455 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SEC22CQ9BRL7 303 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 RHNO1Q9BSD3 238 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
SPIDR-217ENST00000522117 C1QTNF1Q9BXJ1 281 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 MEAF6Q9HAF1 191 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 SRRDQ9UH36 339 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 MID2Q9UJV3 735 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 TLR6Q9Y2C9 796 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
SPIDR-217ENST00000522117 FAM92AA1XBS5 289 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 OR2A25A4D2G3 310 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 SPATA31C2B4DYI2 1134 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-217ENST00000522117 NOBOXO60393 691 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 DLX3O60479 287 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 TRUB2O95900 331 aaKnown RBP11.88□□□□□ -0.51
SPIDR-217ENST00000522117 PROS1P07225 676 aa11.88□□□□□ -0.51
SPIDR-217ENST00000522117 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms