RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MRNIPQ6NTE8 343 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 MAATS1Q7Z4T9 603 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 PRSS42Q7Z5A4 293 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 KMT5CQ86Y97 462 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 GABPB2Q8TAK5 448 aaPredicted RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 CALML6Q8TD86 181 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SEC14L1Q92503 715 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SNF8Q96H20 258 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 CHRNA10Q9GZZ6 450 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 KIR3DX1Q9H7L2 352 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 COG4Q9H9E3 785 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 ENAMQ9NRM1 1142 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 PCDHGA3Q9Y5H0 932 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 MRFAP1Q9Y605 127 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 ZCWPW2A0A1B0GU75 182 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 CDRT15L2A8MXV6 281 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 SLC4A1P02730 911 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 PGAM1P18669 254 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 MAPK9P45984 424 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 PRAMEP78395 509 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SDCCAG8Q86SQ7 713 aaPredicted RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 SPATA4Q8NEY3 305 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 GDAP1Q8TB36 358 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 DDX47Q9H0S4 455 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 EPB41L5Q9HCM4 733 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
CLK4-209ENST00000521621 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 SLC2A6Q9UGQ3 507 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 CDC23Q9UJX2 597 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 KCNK6Q9Y257 313 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 COLEC10Q9Y6Z7 277 aa9.27□□□□□ -0.93
CLK4-209ENST00000521621 ADAMTS20P59510 1910 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 TDRD6O60522 2096 aaKnown RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 GPC4O75487 556 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 GSTA2P09210 222 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SLC19A1P41440 591 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ANKRD20A4Q4UJ75 823 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 KLHL35Q6PF15 583 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 FAM83HQ6ZRV2 1179 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 KIAA0408Q6ZU52 694 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 NEK10Q6ZWH5 1172 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ARHGAP22Q7Z5H3 698 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SLC22A15Q8IZD6 547 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 PANX3Q96QZ0 392 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 PRDM8Q9NQV8 689 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SCHIP1Q9P0W5 487 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 POLG2Q9UHN1 485 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 GNPTGQ9UJJ9 305 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ANAPC5Q9UJX4 755 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 CORO1CQ9ULV4 474 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 PRMT5O14744 637 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 TP73O15350 636 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SLCO2B1O94956 709 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SEC31AO94979 1220 aaKnown RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 FKBP9O95302 570 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ESR1P03372 595 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 MSL3P1P0C860 447 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ACADLP28330 430 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 NMBRP28336 390 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 BOP1Q14137 746 aaKnown RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 CLCA4Q14CN2 919 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 TBC1D25Q3MII6 688 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 PLEKHS1Q5SXH7 462 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 FNBP1LQ5T0N5 605 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 CYB5D1Q6P9G0 228 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 CRTC3Q6UUV7 619 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 UNC5DQ6UXZ4 953 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 PIM3Q86V86 326 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 BPHLQ86WA6 291 aaPredicted RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 PLXDC1Q8IUK5 500 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 RASGRP3Q8IV61 690 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 LPGAT1Q92604 370 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SGF29Q96ES7 293 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 ZNF778Q96MU6 729 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SLC38A3Q99624 504 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 EBNA1BP2Q99848 306 aaKnown RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 FAM167BQ9BTA0 163 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 DDA1Q9BW61 102 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 CCDC86Q9H6F5 360 aaKnown RBP9.26□□□□□ -0.93
CLK4-209ENST00000521621 SMARCAL1Q9NZC9 954 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 OGFRQ9NZT2 677 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 SAMD15Q9P1V8 674 aa9.26□□□□□ -0.93
CLK4-209ENST00000521621 A0A087WV48 116 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 TRABD2BA6NFA1 517 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 KDM1AO60341 852 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 MTX2O75431 263 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 VIPP01282 170 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 POLBP06746 335 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 ITGA2BP08514 1039 aa9.25□□□□□ -0.93
CLK4-209ENST00000521621 SESN2P58004 480 aaPredicted RBP9.25□□□□□ -0.93
CLK4-209ENST00000521621 TMPRSS15P98073 1019 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms