RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RCBTB1Q8NDN9 531 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 PEX13Q92968 403 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 CCDC74BQ96LY2 380 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 DPYSL5Q9BPU6 564 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 IL22Q9GZX6 179 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 ZMYND15Q9H091 742 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 SLC40A1Q9NP59 571 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 BFARQ9NZS9 450 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRIM35-203ENST00000521253 KIF26BQ2KJY2 2108 aa20.24■□□□□ 0.83
TRIM35-203ENST00000521253 ITPR1Q14643 2758 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 KRT37O76014 449 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 THRAP10827 490 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 MGAT1P26572 445 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 ERVPABLB-1P60509 514 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 RPE65Q16518 533 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 ANKRD22Q5VYY1 191 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 TMEM71Q6P5X7 295 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 CFAP206Q8IYR0 622 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 LILRA3Q8N6C8 439 aaPredicted RBP20.23■□□□□ 0.83
TRIM35-203ENST00000521253 OR6P1Q8NGX9 317 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 OR4L1Q8NH43 312 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 CPT1BQ92523 772 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 TMEM159Q96B96 161 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 DCBLD2Q96PD2 775 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 NAPGQ99747 312 aaPredicted RBP20.23■□□□□ 0.83
TRIM35-203ENST00000521253 CMKLR1Q99788 373 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 THSD1Q9NS62 852 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 ACSL5Q9ULC5 683 aa20.23■□□□□ 0.83
TRIM35-203ENST00000521253 A0A087WV48 116 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 ITGA2BP08514 1039 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 JMJD7P0C870 316 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 EIF2S3P41091 472 aaKnown RBP20.22■□□□□ 0.83
TRIM35-203ENST00000521253 PRAMEP78395 509 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 GPR18Q14330 331 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 ITIH4Q14624 930 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 WDR74Q6RFH5 385 aaPredicted RBP20.22■□□□□ 0.83
TRIM35-203ENST00000521253 RBM12BQ8IXT5 1001 aaKnown RBP20.22■□□□□ 0.83
TRIM35-203ENST00000521253 GPR150Q8NGU9 434 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 HM13Q8TCT9 377 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 GRK7Q8WTQ7 553 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 NCSTNQ92542 709 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRIM35-203ENST00000521253 CAPZA3Q96KX2 299 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 CCM2Q9BSQ5 444 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 WWP1Q9H0M0 922 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 EPB41L1Q9H4G0 881 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 TREX1Q9NSU2 369 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 SYBUQ9NX95 663 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 PDP2Q9P2J9 529 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 PISDQ9UG56 409 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 PRSS21Q9Y6M0 314 aa20.22■□□□□ 0.83
TRIM35-203ENST00000521253 C17orf113A0A1B0GUU1 675 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 CDRT15L2A8MXV6 281 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 AVILO75366 819 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 TMEM63AO94886 807 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 AP2A2O94973 939 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 POLBP06746 335 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 ITIH1P19827 911 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 MLLT3P42568 568 aaPredicted RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 NSG1P42857 185 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 SARNPP82979 210 aaKnown RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 TRA2AQ13595 282 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 ZNF658BQ4V348 819 aaPredicted RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 PACS1Q6VY07 963 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 CREG2Q8IUH2 290 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 SPDYE1Q8NFV5 336 aaPredicted RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 SGSM3Q96HU1 749 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 INSM2Q96T92 566 aaPredicted RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 KIFC1Q9BW19 673 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 DDX47Q9H0S4 455 aaKnown RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 VPS37BQ9H9H4 285 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 IMP3Q9NV31 184 aaKnown RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 OGFRQ9NZT2 677 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 CFAP20Q9Y6A4 193 aaKnown RBP20.21■□□□□ 0.83
TRIM35-203ENST00000521253 SAR1BQ9Y6B6 198 aa20.21■□□□□ 0.83
TRIM35-203ENST00000521253 FANCGO15287 622 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 UBXN7O94888 489 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 SLC35G4P0C7Q5 338 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 MTHFD1P11586 935 aaKnown RBP20.2■□□□□ 0.82
TRIM35-203ENST00000521253 TYRP1P17643 537 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 NMBRP28336 390 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 ETV5P41161 510 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 PCBP4P57723 403 aaKnown RBP20.2■□□□□ 0.82
TRIM35-203ENST00000521253 SEMA3AQ14563 771 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 FASTKD1Q53R41 847 aaKnown RBP20.2■□□□□ 0.82
TRIM35-203ENST00000521253 LYPLAL1Q5VWZ2 237 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 CERS6Q6ZMG9 384 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 CLEC14AQ86T13 490 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 CAND1Q86VP6 1230 aaKnown RBP20.2■□□□□ 0.82
TRIM35-203ENST00000521253 RMDN2Q96LZ7 410 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 C12orf66Q96MD2 445 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 COG4Q9H9E3 785 aa20.2■□□□□ 0.82
TRIM35-203ENST00000521253 AKAP7Q9P0M2 348 aaPredicted RBP20.2■□□□□ 0.82
TRIM35-203ENST00000521253 CHD6Q8TD26 2715 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 CTAGE9A4FU28 777 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 OR1I1O60431 355 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 CCL4P13236 92 aa20.19■□□□□ 0.82
TRIM35-203ENST00000521253 PPP1R7Q15435 360 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms