RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	NR2F2	P24468	414 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ARCN1	P48444	511 aa	Known RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PEX5	P50542	639 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	COASY	Q13057	564 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	GTF2H2	Q13888	395 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	KYNU	Q16719	465 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	GTF2H2C	Q6P1K8	395 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FIGLA	Q6QHK4	219 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PLXDC2	Q6UX71	529 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	DSG4	Q86SJ6	1040 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	GBGT1	Q8N5D6	347 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	C1orf52	Q8N6N3	182 aa	Known RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	AVL9	Q8NBF6	648 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OR2AJ1	Q8NGZ0	328 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CFAP61	Q8NHU2	1237 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OLIG1	Q8TAK6	271 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	LNX1	Q8TBB1	728 aa	Predicted RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	MAGEC3	Q8TD91	643 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PTER	Q96BW5	349 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PGAP3	Q96FM1	320 aa	Predicted RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF830	Q96NB3	372 aa	Predicted RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF385A	Q96PM9	386 aa	Known RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SLX1A	Q9BQ83	275 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TM6SF1	Q9BZW5	370 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	LRMDA	Q9H2I8	198 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OLAH	Q9NV23	265 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PSD3	Q9NYI0	1048 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	AMACR	Q9UHK6	382 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PRDM2	Q13029	1718 aa		4.37	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TOP2A	P11388	1531 aa	Known RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	IGHV4OR15-8	A0A075B7B6	117 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SAA2-SAA4	A0A096LPE2	208 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PRSS51	A0A1B0GVH4	220 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNHIT1	O43257	154 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OR10H2	O60403	315 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TBX10	O75333	385 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TADA2A	O75478	443 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FAM106CP	P0CH98	169 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	POLR2C	P19387	275 aa	Predicted RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	MC5R	P33032	325 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ART1	P52961	327 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	KIF19	Q2TAC6	998 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FAM171B	Q6P995	826 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SLC9B2	Q86UD5	537 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CEP57L1	Q8IYX8	460 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TDRD5	Q8NAT2	981 aa	Known RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	POGLUT1	Q8NBL1	392 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SNRNP27	Q8WVK2	155 aa	Known RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PHF21A	Q96BD5	680 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CCDC34	Q96HJ3	373 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FAM84B	Q96KN1	310 aa	Predicted RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PRMT6	Q96LA8	375 aa	Predicted RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	IL17F	Q96PD4	163 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CCDC106	Q9BWC9	280 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	UBTD1	Q9HAC8	227 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	HAO2	Q9NYQ3	351 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	NPAP1	Q9NZP6	1156 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	VDAC3	Q9Y277	283 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF541	Q9H0D2	1346 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TCF20	Q9UGU0	1960 aa	Known RBP	4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PTPRM	P28827	1452 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	IFT140	Q96RY7	1462 aa		4.36	□□□□□ -1.71
CTNNA1-222	ENST00000520400	IGKV2D-30	A0A075B6S6	120 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ASPDH	A6ND91	283 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400		A6NL46	340 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TPO	P07202	933 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	GM2A	P17900	193 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CCKAR	P32238	428 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	HSPA1L	P34931	641 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	LIG4	P49917	911 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	MMP15	P51511	669 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF132	P52740	706 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	CTSC	P53634	463 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SIRPA	P78324	504 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	RPL24	P83731	157 aa	Known RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	AIMP1	Q12904	312 aa	Known RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SNTB1	Q13884	538 aa	Known RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	SLC39A14	Q15043	492 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	KLHL26	Q53HC5	615 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF628	Q5EBL2	1059 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZDHHC20	Q5W0Z9	365 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TRNP1	Q6NT89	227 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FAM122C	Q6P4D5	195 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	KRT74	Q7RTS7	529 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	KMT5C	Q86Y97	462 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TMTC2	Q8N394	836 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	RADIL	Q96JH8	1075 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	OR6C1	Q96RD1	312 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	FAM129A	Q9BZQ8	928 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	MMP27	Q9H306	513 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TBC1D17	Q9HA65	648 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PELI2	Q9HAT8	420 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TRPC7	Q9HCX4	862 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	TCP11L1	Q9NUJ3	509 aa		4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.35	□□□□□ -1.71
CTNNA1-222	ENST00000520400	ZNF644	Q9H582	1327 aa	Predicted RBP	4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms