RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF385BQ569K4 471 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SFT2D3Q587I9 215 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 PIGGQ5H8A4 983 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SIRPB2Q5JXA9 342 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CPZQ66K79 652 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RAP1GAP2Q684P5 730 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ZNF470Q6ECI4 717 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 OR52E8Q6IFG1 317 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CXorf57Q6NSI4 855 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RWDD4Q6NW29 188 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 FUT10Q6P4F1 479 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CD300LDQ6UXZ3 194 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 KIAA0408Q6ZU52 694 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RAPH1Q70E73 1250 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RPS27LQ71UM5 84 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 PDZD4Q76G19 769 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CCDC91Q7Z6B0 441 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TFAP2DQ7Z6R9 452 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TMEM150AQ86TG1 271 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 DDX53Q86TM3 631 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 LINC00523Q86TU6 105 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 STK32CQ86UX6 486 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 KBTBD6Q86V97 674 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 MON1AQ86VX9 555 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 METTL23Q86XA0 190 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 LRRC49Q8IUZ0 686 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SCN4BQ8IWT1 228 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 NUP93Q8N1F7 819 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TTC30BQ8N4P2 665 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SLC25A41Q8N5S1 370 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 DNAAF3Q8N9W5 541 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TDRD5Q8NAT2 981 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 GPR150Q8NGU9 434 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CD99L2Q8TCZ2 262 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 GDPD5Q8WTR4 605 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 N4BP2L2Q92802 583 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 PSMG2Q969U7 264 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 NAF1Q96HR8 494 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ATOH8Q96SQ7 321 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 NDNQ99608 321 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 MGME1Q9BQP7 344 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TUBB6Q9BUF5 446 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CCDC28BQ9BUN5 200 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TRIM62Q9BVG3 475 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SHCBP1LQ9BZQ2 653 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ZYG11BQ9C0D3 744 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 MFSD1Q9H3U5 465 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ZCCHC4Q9H5U6 513 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CXorf56Q9H5V9 222 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ELAC1Q9H777 363 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SUDS3Q9H7L9 328 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CATSPERBQ9H7T0 1116 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 NT5MQ9NPB1 228 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ENTPD7Q9NQZ7 604 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 TMEM161AQ9NX61 479 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ZDHHC7Q9NXF8 308 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CPSF2Q9P2I0 782 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 DNMT3BQ9UBC3 853 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CDH22Q9UJ99 828 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RIMS3Q9UJD0 308 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 VPS28Q9UK41 221 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 SARDHQ9UL12 918 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 RIMKLBQ9ULI2 386 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 POMPQ9Y244 141 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 PRG3Q9Y2Y8 225 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 AAR2Q9Y312 384 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 NEUROG3Q9Y4Z2 214 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 OR51B4Q9Y5P0 310 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 IRAK3Q9Y616 596 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 COPG1Q9Y678 874 aaKnown RBP4.5□□□□□ -1.69
PABPC1-212ENST00000519622 ADAMTS20P59510 1910 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 CENPFP49454 3210 aa4.5□□□□□ -1.69
PABPC1-212ENST00000519622 A0A087X1B8 175 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 A0A0D9SEW6 157 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 PRSS51A0A1B0GVH4 220 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 CCDC162PA2VCL2 907 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 ASPDHA6ND91 283 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 OR6C75A6NL08 312 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 SLC38A8A6NNN8 435 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 E9PBE3 544 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 FXYD1O00168 92 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 SCDO00767 359 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 GAPDHSO14556 408 aaPredicted RBP4.49□□□□□ -1.69
PABPC1-212ENST00000519622 ACOT8O14734 319 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 TRIM24O15164 1050 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 GSTA4O15217 222 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 SLC22A2O15244 555 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 HDAC3O15379 428 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 NVLO15381 856 aaKnown RBP4.49□□□□□ -1.69
PABPC1-212ENST00000519622 SLC7A4O43246 635 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 DCXO43602 365 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 KLHL41O60662 606 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 LRG1P02750 347 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 APOA4P06727 396 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 GALTP07902 379 aa4.49□□□□□ -1.69
PABPC1-212ENST00000519622 RPSAP08865 295 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms