RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TTC1Q99614 292 aa14.28□□□□□ -0.12
CLN8-204ENST00000519254 RIOK2Q9BVS4 552 aaKnown RBP14.28□□□□□ -0.12
CLN8-204ENST00000519254 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
CLN8-204ENST00000519254 NCKAP1Q9Y2A7 1128 aa14.28□□□□□ -0.12
CLN8-204ENST00000519254 DHRS7Q9Y394 339 aa14.28□□□□□ -0.12
CLN8-204ENST00000519254 NPEPPSL1A6NEC2 478 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 PSMD11O00231 422 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 TSPAN6O43657 245 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 RECQL5O94762 991 aaPredicted RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 DCNP07585 359 aaKnown RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 ADPRHP54922 357 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 HERVK_113P63132 956 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 UBAP2LQ14157 1087 aaKnown RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 ZNF284Q2VY69 593 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 FBXW10Q5XX13 1052 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 UGT3A1Q6NUS8 523 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 TECPR1Q7Z6L1 1165 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 CPNE9Q8IYJ1 553 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 CLDN19Q8N6F1 224 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 PTGR2Q8N8N7 351 aaPredicted RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 FUBP1Q96AE4 644 aaKnown RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 AP2M1Q96CW1 435 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 NUS1Q96E22 293 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 LINGO1Q96FE5 620 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 ERVK-6Q9BXR3 956 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 OSBPL6Q9BZF3 934 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 SARS2Q9NP81 518 aaKnown RBP14.27□□□□□ -0.12
CLN8-204ENST00000519254 TNFRSF12AQ9NP84 129 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 VTI1BQ9UEU0 232 aa14.27□□□□□ -0.12
CLN8-204ENST00000519254 IGLON5A6NGN9 336 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 TMEM233B4DJY2 109 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 SLCO1B7G3V0H7 640 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 UBFD1O14562 309 aaKnown RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 PLRG1O43660 514 aaKnown RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 AP1G1O43747 822 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 KRT16P08779 473 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 PTPN4P29074 926 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 TPMTP51580 245 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 GALNT1Q10472 559 aaPredicted RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 PFKFB4Q16877 469 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 MACC1Q6ZN28 852 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 LKAAEAR1Q8TD35 194 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 KLK6Q92876 244 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 UTP4Q969X6 686 aaKnown RBP14.27□□□□□ -0.13
CLN8-204ENST00000519254 DTD2Q96FN9 168 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 OR52B2Q96RD2 323 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 TMPRSS11EQ9UL52 423 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 RNF112Q9ULX5 631 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 SIT1Q9Y3P8 196 aa14.27□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3DA0A087WVF3 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3IA0A087WXS9 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3EA0A087X179 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3KA0A087X1G2 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3FA6NER0 549 aaPredicted RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 LRRC14BA6NHZ5 514 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3LB9A6J9 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 BTN3A1O00481 513 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 HNRNPCL1O60812 293 aaKnown RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 SIX3O95343 332 aaPredicted RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3HP0C7X1 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 CALB2P22676 271 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 RASSF2P50749 326 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 DCDC1P59894 354 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 ELF3P78545 371 aaPredicted RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 SH2D4BQ5SQS7 431 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 HENMT1Q5T8I9 393 aaKnown RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3GQ6DHY5 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3CQ6IPX1 549 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 USP30Q70CQ3 517 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 CUZD1Q86UP6 607 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TBC1D3Q8IZP1 549 aaPredicted RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 STON2Q8WXE9 905 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 PDLIM5Q96HC4 596 aaKnown RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 TRMOQ9BU70 441 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 NUF2Q9BZD4 464 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 RASSF4Q9H2L5 321 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 WDR55Q9H6Y2 383 aaPredicted RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 EML4Q9HC35 981 aaKnown RBP14.26□□□□□ -0.13
CLN8-204ENST00000519254 ZDHHC3Q9NYG2 299 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 FZD4Q9ULV1 537 aa14.26□□□□□ -0.13
CLN8-204ENST00000519254 TRIOO75962 3097 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 GOLGA8QA0A0J9YX86 632 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 CCDC189A1A4V9 331 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 RGSL1A5PLK6 1076 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 GOLGA8OA6NCC3 632 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 SUPT3HB4E1H0 165 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 GOLGA8NF8WBI6 632 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 KLK8O60259 260 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 RNGTTO60942 597 aaKnown RBP14.25□□□□□ -0.13
CLN8-204ENST00000519254 SUPT3HO75486 399 aa14.25□□□□□ -0.13
CLN8-204ENST00000519254 TM7SF2O76062 418 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms