RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-219ENST00000518824 KLHL3Q9UH77 587 aa13.04□□□□□ -0.32
VEGFA-219ENST00000518824 DNMT3AQ9Y6K1 912 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-219ENST00000518824 DSPP15924 2871 aaKnown RBP13.04□□□□□ -0.32
VEGFA-219ENST00000518824 CFAP47Q6ZTR5 3102 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 HEATR9A2RTY3 570 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 LILRA5A6NI73 299 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 C9orf172C9J069 976 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 SLC2A4P14672 509 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 ADRA1DP25100 572 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 RBMS1P29558 406 aaKnown RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 PDHA2P29803 388 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 SLC5A2P31639 672 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 LEPRP48357 1165 aaKnown RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 ERVPABLB-1P60509 514 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 GPLD1P80108 840 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 KCNJ11Q14654 390 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 SKIDA1Q1XH10 827 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 CCDC137Q6PK04 289 aaKnown RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 CLEC14AQ86T13 490 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 TRIM48Q8IWZ4 208 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 CFAP206Q8IYR0 622 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 LSMEM2Q8N112 164 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 OR10G6Q8NH81 332 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 ACTRT1Q8TDG2 376 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 CPT1BQ92523 772 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 USP7Q93009 1102 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 RNF31Q96EP0 1072 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 DCUN1D1Q96GG9 259 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 LINC00615Q96LM1 132 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-219ENST00000518824 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
VEGFA-219ENST00000518824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 DUX1O43812 170 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 PRAMEF10O60809 474 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 ITGA2BP08514 1039 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 F7P08709 466 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 JMJD7P0C870 316 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 VCLP18206 1134 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 ARNTP27540 789 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 PREPP48147 710 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 EPHA4P54764 986 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 PCBP4P57723 403 aaKnown RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 GNG11P61952 73 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 TGIF1Q15583 401 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 ARHGAP22Q7Z5H3 698 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 JAMLQ86YT9 394 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 LKAAEAR1Q8TD35 194 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 CXorf40BQ96DE9 158 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 ZNF514Q96K75 400 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 CAPZA3Q96KX2 299 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 C12orf66Q96MD2 445 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 ZMYND15Q9H091 742 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 STN1Q9H668 368 aaKnown RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 COG4Q9H9E3 785 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 UCK1Q9HA47 277 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 THSD1Q9NS62 852 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 TREX1Q9NSU2 369 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 POT1Q9NUX5 634 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 IMP3Q9NV31 184 aaKnown RBP13.02□□□□□ -0.33
VEGFA-219ENST00000518824 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
VEGFA-219ENST00000518824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.332e-24■■■□□ 17.7
VEGFA-219ENST00000518824 SDK2Q58EX2 2172 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 GOLGA8TH3BQL2 631 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 TMX2-CTNND1H3BSU7 103 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 KCNJ13O60928 360 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 PHF2O75151 1096 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 UBXN7O94888 489 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 RALBP11234 206 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 ITGB6P18564 788 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 TPSB2P20231 275 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 TLE3Q04726 772 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 EIF3IQ13347 325 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 GSE1Q14687 1217 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 BRD3Q15059 726 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 TPSAB1Q15661 275 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 PCID2Q5JVF3 399 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 CAPRIN2Q6IMN6 1127 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 WDR74Q6RFH5 385 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 ZFAND4Q86XD8 727 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 BMPERQ8N8U9 685 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 PPHLN1Q8NEY8 458 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 OR6P1Q8NGX9 317 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 OR4L1Q8NH43 312 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 HM13Q8TCT9 377 aa13.01□□□□□ -0.33
VEGFA-219ENST00000518824 ANP32BQ92688 251 aaKnown RBP13.01□□□□□ -0.33
VEGFA-219ENST00000518824 CMKLR1Q99788 373 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms