RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ABRAXAS1Q6UWZ7 409 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 NEK10Q6ZWH5 1172 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 DET1Q7L5Y6 550 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 CHST15Q7LFX5 561 aaPredicted RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 RD3Q7Z3Z2 195 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 LCA5Q86VQ0 697 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 NKAPQ8N5F7 415 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 ACMSDQ8TDX5 336 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 DCAKDQ8WVC6 231 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 ISL2Q96A47 359 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 TMEM159Q96B96 161 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 PDLIM5Q96HC4 596 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 CABS1Q96KC9 395 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 DUSP23Q9BVJ7 150 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 TMEM168Q9H0V1 697 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 GAREM1Q9H706 876 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 MRPL40Q9NQ50 206 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 DNAAF2Q9NVR5 837 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 NCKIPSDQ9NZQ3 722 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 TRMT6Q9UJA5 497 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 PLAAQ9Y263 795 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 MTO1Q9Y2Z2 717 aaKnown RBP9.31□□□□□ -0.92
CLN8-203ENST00000518780 NFS1Q9Y697 457 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 PRSS21Q9Y6M0 314 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 PLXNA2O75051 1894 aa9.31□□□□□ -0.92
CLN8-203ENST00000518780 SLC5A10A0PJK1 596 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 DYNC1I1O14576 645 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 AQP9O43315 295 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ATP8B1O43520 1251 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SHBGP04278 402 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 MPOP05164 745 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ANXA6P08133 673 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ALPPL2P10696 532 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 COL6A2P12110 1019 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ACP5P13686 325 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ENGP17813 658 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 GCAP28676 217 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 EPHA8P29322 1005 aaPredicted RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 CCR7P32248 378 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 HALP42357 657 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SERPINB8P50452 374 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 IL2P60568 153 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 RAB10P61026 200 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 GBX1Q14549 363 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 EFTUD2Q15029 972 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLN8-203ENST00000518780 ZKSCAN8Q15776 578 aaPredicted RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 SMAD1Q15797 465 aaKnown RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 INAVAQ3KP66 663 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SYTL3Q4VX76 610 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 UBAP2Q5T6F2 1119 aaKnown RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 LAYNQ6UX15 382 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 TAF8Q7Z7C8 310 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 CFAP206Q8IYR0 622 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ZBTB2Q8N680 514 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ZNF548Q8NEK5 533 aaPredicted RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 ZFPM2Q8WW38 1151 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ELMO1Q92556 727 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 GLMNQ92990 594 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 ELMO2Q96JJ3 720 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 RUFY1Q96T51 708 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 LRRC61Q9BV99 259 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 STMN4Q9H169 189 aaPredicted RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 ACBD3Q9H3P7 528 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 COG4Q9H9E3 785 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 KLC4Q9NSK0 619 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SEMA4GQ9NTN9 838 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SENP1Q9P0U3 644 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SLC17A6Q9P2U8 582 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 GULP1Q9UBP9 304 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SLC23A2Q9UGH3 650 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 LGALS13Q9UHV8 139 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 TLK1Q9UKI8 766 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 SLC39A10Q9ULF5 831 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 PNMA8BQ9ULN7 279 aaPredicted RBP9.3□□□□□ -0.92
CLN8-203ENST00000518780 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 MED16Q9Y2X0 877 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 HEBP2Q9Y5Z4 205 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 GPR179Q6PRD1 2367 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
CLN8-203ENST00000518780 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 A0A087X1B8 175 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 KIR2DS5A0A0G2JLQ3 304 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 A0A0G2JNG1 304 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 GOLGA6L10A6NI86 522 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 PATE3B3GLJ2 98 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 KIR2DS3K7RE56 304 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 IFRD1O00458 451 aaPredicted RBP9.29□□□□□ -0.92
CLN8-203ENST00000518780 NIPSNAP2O75323 286 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 PIAS1O75925 651 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 RPN2P04844 631 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 MPC1LP0DKB6 136 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 F3P13726 295 aa9.29□□□□□ -0.92
CLN8-203ENST00000518780 NDUFS1P28331 727 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms