RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FAM136AQ96C01 138 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 MRRFQ96E11 262 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 ATXN7L3BQ96GX2 97 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 VPS39Q96JC1 886 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 ZNF514Q96K75 400 aaPredicted RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 PAFAH2Q99487 392 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GPR22Q99680 433 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GTPBP2Q9BX10 602 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 ZCCHC2Q9C0B9 1178 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 KLC4Q9NSK0 619 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 SPATS2LQ9NUQ6 558 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 DNAAF2Q9NVR5 837 aaKnown RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 SCHIP1Q9P0W5 487 aaPredicted RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 TBC1D29Q9UFV1 150 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 GNPTGQ9UJJ9 305 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 WDR37Q9Y2I8 494 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
CLN8-202ENST00000517514 DNMT3AQ9Y6K1 912 aaPredicted RBP9.71□□□□□ -0.86
CLN8-202ENST00000517514 COL5A1P20908 1838 aaPredicted RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 C17orf113A0A1B0GUU1 675 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 FOXO6A8MYZ6 492 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 LMO7DNF2Z398 122 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 POC1B-GALNT4F8VUJ3 575 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 YY2O15391 372 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 AQP9O43315 295 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 TCEA3O75764 348 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 TRIM16O95361 564 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 OR56A5P0C7T3 313 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 RALBP11234 206 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CD59P13987 128 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CD9P21926 228 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 PPARGP37231 505 aaPredicted RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 PREPP48147 710 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 BMPR2Q13873 1038 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 ZNF460Q14592 562 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 KLHL38Q2WGJ6 581 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 GRTP1Q5TC63 336 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 METRNLQ641Q3 311 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 PTRHD1Q6GMV3 140 aaKnown RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 ADGRD1Q6QNK2 874 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 IL27RAQ6UWB1 636 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 AMZ2Q86W34 360 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 RASGRP3Q8IV61 690 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CYP4X1Q8N118 509 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 SIDT2Q8NBJ9 832 aaKnown RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 HM13Q8TCT9 377 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CD200R1Q8TD46 325 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 LMX1AQ8TE12 382 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 PATE1Q8WXA2 126 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CDKL2Q92772 493 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 TTC1Q99614 292 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 GPR21Q99679 349 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 SLC13A1Q9BZW2 595 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 OR52A5Q9H2C5 316 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 COG4Q9H9E3 785 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CAB39LQ9H9S4 337 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 PRDM8Q9NQV8 689 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 NSMCE4AQ9NXX6 385 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 TAAR2Q9P1P5 351 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CTNNAL1Q9UBT7 734 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 FETUBQ9UGM5 382 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 VPS9D1Q9Y2B5 631 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 BTBD3Q9Y2F9 522 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 DNAJC16Q9Y2G8 782 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 VWA7Q9Y334 891 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 DHRS7Q9Y394 339 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 CSNK1G3Q9Y6M4 447 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 U3KQA8 63 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
CLN8-202ENST00000517514 GVINP1Q7Z2Y8 2422 aa9.7□□□□□ -0.86
CLN8-202ENST00000517514 PRAMEF33A0A0G2JMD5 474 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 EXOC1LA0A1B0GW35 172 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 FAM186AA6NE01 2351 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 TRIM38O00635 465 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 PCDHGA12O60330 932 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 NOBOXO60393 691 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 DFNA5O60443 496 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 SLCO2B1O94956 709 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CER1O95813 267 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 TSPAN12O95859 305 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ITGA2BP08514 1039 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 MYF5P13349 255 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ACADLP28330 430 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ACTR1BP42025 376 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 MAGEA12P43365 314 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CCT8P50990 548 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 BLKP51451 505 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ACTR1AP61163 376 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 LRP8Q14114 963 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CLCA4Q14CN2 919 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ZKSCAN8Q15776 578 aaPredicted RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 INSCQ1MX18 579 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 DEFB133Q30KQ1 61 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 ACSBG2Q5FVE4 666 aa9.69□□□□□ -0.86
CLN8-202ENST00000517514 CAPRIN2Q6IMN6 1127 aaKnown RBP9.69□□□□□ -0.86
CLN8-202ENST00000517514 SLC30A9Q6PML9 568 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms