RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 BFARQ9NZS9 450 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MOSPD1Q9UJG1 213 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NEU2Q9Y3R4 380 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PKP3Q9Y446 797 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KCTD3Q9Y597 815 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SNX11Q9Y5W9 270 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ST14Q9Y5Y6 855 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ARL5AQ9Y689 179 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 EML5Q05BV3 1969 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KNL1Q8NG31 2342 aa5.76□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SPAG17Q6Q759 2223 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TCRBV7S3A2A0A539 114 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SHISA3A0PJX4 238 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CTAGE15A4D2H0 777 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 C4orf47A7E2U8 309 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 EFCAB8A8MWE9 144 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 K7ESM1 405 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 AP3B1O00203 1094 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DNALI1O14645 258 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TOR1BO14657 336 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 INPP4BO15327 924 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 AVILO75366 819 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PYGLP06737 847 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CTAGE8P0CG41 777 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TSHRP16473 764 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 BPIP17213 487 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NAT1P18440 290 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TPSB2P20231 275 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TGM1P22735 817 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ADRA1DP25100 572 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MGAT1P26572 445 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 HTR1BP28222 390 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SPAM1P38567 509 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ID4P47928 161 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NPY2RP49146 381 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PFN3P60673 137 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 YPEL5P62699 121 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CDK16Q00536 496 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 BNC1Q01954 994 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DPTQ07507 201 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OVGP1Q12889 678 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GRIK2Q13002 908 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MSLNQ13421 630 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MTM1Q13496 603 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 LAMB3Q13751 1172 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PTK6Q13882 451 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DHX34Q14147 1143 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TPSAB1Q15661 275 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CHRNA6Q15825 494 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SKIDA1Q1XH10 827 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CCDC38Q502W7 563 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZNF542PQ5EBM4 170 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ANKRD22Q5VYY1 191 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 IZUMO3Q5VZ72 239 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZDHHC20Q5W0Z9 365 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 LRRC8BQ6P9F7 803 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CRTC3Q6UUV7 619 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 IL27RAQ6UWB1 636 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FAM151BQ6UXP7 276 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KYAT3Q6YP21 454 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PRR23CQ6ZRP0 262 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SYDE1Q6ZW31 735 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ABI3BPQ7Z7G0 1075 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MTDHQ86UE4 582 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CTAGE6Q86UF2 777 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 IQCHQ86VS3 1027 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 WDR75Q8IWA0 830 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CTAGE4Q8IX94 777 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KLHDC8BQ8IXV7 354 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KIAA2013Q8IYS2 634 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PELI3Q8N2H9 469 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TTC30BQ8N4P2 665 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CEP112Q8N8E3 955 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 BBOF1Q8ND07 529 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GPR26Q8NDV2 337 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR13C4Q8NGS5 318 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR2I1PQ8NGU4 316 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SLCO2A1Q92959 643 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FUBP1Q96AE4 644 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FCRL3Q96P31 734 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TRIM51Q9BSJ1 452 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZDHHC5Q9C0B5 715 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GAREM1Q9H706 876 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ASB8Q9H765 288 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 WDR26Q9H7D7 661 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SUDS3Q9H7L9 328 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CASS4Q9NQ75 786 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 EIF2B3Q9NR50 452 aaKnown RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PHPT1Q9NRX4 125 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RXFP3Q9NSD7 469 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DNAJC28Q9NX36 388 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 IL17CQ9P0M4 197 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TMEFF2Q9UIK5 374 aaPredicted RBP5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TMEM98Q9Y2Y6 226 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SNX24Q9Y343 169 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR1A2Q9Y585 309 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NPFFR2Q9Y5X5 522 aa5.75□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MRFAP1Q9Y605 127 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms