RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 ZCCHC12Q6PEW1 402 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PAPD4Q6PIY7 484 aaKnown RBP0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 KSR2Q6VAB6 950 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SRLQ86TD4 932 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ZNF354CQ86Y25 554 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LACC1Q8IV20 430 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MARVELD2Q8N4S9 558 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 CD177Q8N6Q3 437 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 GPRC5AQ8NFJ5 357 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 OR2T11Q8NH01 316 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LRRC15Q8TF66 581 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 NPRL2Q8WTW4 380 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ZFAND2BQ8WV99 257 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 HPSE2Q8WWQ2 592 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 DYRK2Q92630 601 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PHYHIPLQ96FC7 376 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRICKLE1Q96MT3 831 aaPredicted RBP0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 RMDN3Q96TC7 470 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 CTRCQ99895 268 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 YTHDF1Q9BYJ9 559 aaKnown RBP0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TMEM39BQ9GZU3 492 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLITRK2Q9H156 845 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MED20Q9H944 212 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLC28A3Q9HAS3 691 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 B3GAT2Q9NPZ5 323 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 KLHL9Q9P2J3 617 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FBXL17Q9UF56 701 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 GTF3C4Q9UKN8 822 aa0.81□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TEX13CA0A0J9YWL9 993 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 C5orf60A6NFR6 353 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LRRC53A6NM62 1247 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 EPM2AB3EWF7 344 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLC33A1O00400 549 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ACKR2O00590 384 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 KLK10O43240 276 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TSPAN3O60637 253 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRKRAO75569 313 aaKnown RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLCO2B1O94956 709 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PIGNO95427 931 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MLYCDO95822 493 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 HOXD4P09016 255 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 HOXB5P09067 269 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ALOX5P09917 674 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ZNF853P0CG23 659 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FOLR2P14207 255 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 IL4RP24394 825 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 OPRL1P41146 370 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SOX3P41225 446 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PSMC4P43686 418 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRKAA2P54646 552 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 UCNP55089 124 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 CDH15P55291 814 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 HNRNPKP61978 463 aaKnown RBP eCLIP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LGALS3BPQ08380 585 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 RNPS1Q15287 305 aaKnown RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRR30Q53SZ7 412 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TMEM81Q6P7N7 255 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 NOTUMQ6P988 496 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLC22A25Q6T423 547 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TIFABQ6ZNK6 161 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ADGRD2Q7Z7M1 963 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TSPAN33Q86UF1 283 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 NRROSQ86YC3 692 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 OR4N5Q8IXE1 308 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 CCDC13Q8IYE1 715 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PM20D2Q8IYS1 436 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 NFAM1Q8NET5 270 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 OR4C3Q8NH37 302 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MAPK15Q8TD08 544 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ZNF721Q8TF20 911 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 RUFY2Q8WXA3 655 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SMPDL3BQ92485 455 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SGCZQ96LD1 299 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MYADMQ96S97 322 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM167BQ9BTA0 163 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TEX13BQ9BXU2 312 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SLC39A8Q9C0K1 460 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM49AQ9H0Q0 323 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 C20orf141Q9NUB4 165 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 NDE1Q9NXR1 346 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 A4GNTQ9UNA3 340 aa0.8□□□□□ -2.28
RNU6-1258P-201ENST00000516911 A0A087WUV0 522 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 A0A087WV62 115 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 GOLGA6L10A0A0M3HER8 536 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MED19A0JLT2 244 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM90A7PA6NKC0 464 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 C15orf61A6NNL5 157 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MPTX1A8MV57 137 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM90A22PA8MWA6 464 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM90A12PA8MX19 464 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 FAM90A23PA8MXZ1 464 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SRRM5B3KS81 715 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TFECO14948 347 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 IRAK2O43187 625 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 KHDRBS3O75525 346 aaKnown RBP0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TK1P04183 234 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRKAR1AP10644 381 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 ZNF182P17025 639 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LHCGRP22888 699 aa0.79□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PRCPP42785 496 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms