RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 WT1P19544 449 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-215ENST00000515516 CDC25BP30305 580 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 ARL4DP49703 201 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 IL11RAQ14626 422 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 GSE1Q14687 1217 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 P3H1Q32P28 736 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 BCL7AQ4VC05 210 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 ZNF449Q6P9G9 518 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 BORAQ6PGQ7 559 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 FAM83HQ6ZRV2 1179 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-215ENST00000515516 PRSS42Q7Z5A4 293 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 SNX20Q7Z614 316 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 EXD3Q8N9H8 876 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 RSC1A1Q92681 617 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 C12orf66Q96MD2 445 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 CATSPER2Q96P56 530 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 OR6C1Q96RD1 312 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 COPS8Q99627 209 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 CCM2Q9BSQ5 444 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 SLC12A9Q9BXP2 914 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 ULBP3Q9BZM4 244 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 RAB33BQ9H082 229 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 WWP1Q9H0M0 922 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 FAM96AQ9H5X1 160 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 ARNT2Q9HBZ2 717 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 PACSIN2Q9UNF0 486 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-215ENST00000515516 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-215ENST00000515516 COLEC10Q9Y6Z7 277 aa13.38□□□□□ -0.27
TCOF1-215ENST00000515516 LOC400499M0QZD8 3231 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 GAS8O95995 478 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 POLBP06746 335 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 MTHFD1P11586 935 aaKnown RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 ATP1B2P14415 290 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 CA5AP35218 305 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 XIAPP98170 497 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 MC1RQ01726 317 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 SEPT6Q14141 434 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 MAP7Q14244 749 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 SEL1L2Q5TEA6 688 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 TAS2R42Q7RTR8 314 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 CFAP206Q8IYR0 622 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 RNF10Q8N5U6 811 aaKnown RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 SIDT2Q8NBJ9 832 aaKnown RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 OR13C4Q8NGS5 318 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 KLHL6Q8WZ60 621 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 UBXN4Q92575 508 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 ELMO2Q96JJ3 720 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 VPS37BQ9H9H4 285 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 PDE7BQ9NP56 450 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 SIDT1Q9NXL6 827 aaKnown RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 HEBP2Q9Y5Z4 205 aa13.37□□□□□ -0.27
TCOF1-215ENST00000515516 CFAP20Q9Y6A4 193 aaKnown RBP13.37□□□□□ -0.27
TCOF1-215ENST00000515516 UBA6A0AVT1 1052 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 J3QKU1 62 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 CCNYL3P0C7X3 344 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 TPH1P17752 444 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 NDUFS1P28331 727 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 MC4RP32245 332 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 CCR10P46092 362 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 LMAN1P49257 510 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 ZNF140P52738 457 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 SH3BP2P78314 561 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 DNTTIP2Q5QJE6 756 aaKnown RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 DENND5AQ6IQ26 1287 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 TIPARPQ7Z3E1 657 aaKnown RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 LINC00523Q86TU6 105 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 OOSP2Q86WS3 158 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 PPP1R3BQ86XI6 285 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 UNC5BQ8IZJ1 945 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 GPR150Q8NGU9 434 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 HM13Q8TCT9 377 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 UBE2Q2Q8WVN8 375 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 STAMBPL1Q96FJ0 436 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 SLC45A3Q96JT2 553 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 LINC00615Q96LM1 132 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 INSM2Q96T92 566 aaPredicted RBP13.36□□□□□ -0.27
TCOF1-215ENST00000515516 CD180Q99467 661 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
TCOF1-215ENST00000515516 FRMD8P1Q9BZ68 369 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms