RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 NEU2Q9Y3R4 380 aa11.3□□□□□ -0.6
SUB1-213ENST00000515355 DNMT3AQ9Y6K1 912 aaPredicted RBP11.3□□□□□ -0.6
SUB1-213ENST00000515355 PRSS21Q9Y6M0 314 aa11.3□□□□□ -0.6
SUB1-213ENST00000515355 RP1P56715 2156 aa11.3□□□□□ -0.6
SUB1-213ENST00000515355 KNTC1P50748 2209 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 ARHGEF17Q96PE2 2063 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 TRBV5-4A0A0C4DH59 114 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 UBA6A0AVT1 1052 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 PMS2P1A4D2B8 440 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 A6NCN8 305 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 AGAP14A8MT82 685 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 TMX2-CTNND1H3BSU7 103 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 TTI1O43156 1089 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 SGTAO43765 313 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 NDUFS3O75489 264 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 TNFSF15O95150 251 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 OR56A5P0C7T3 313 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 XRCC1P18887 633 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 PAMP19021 973 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 NSG1P42857 185 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PTGIRP43119 386 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PREPP48147 710 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PRLHRP49683 370 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 MAPK10P53779 464 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PTK6Q13882 451 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 BOP1Q14137 746 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 RPE65Q16518 533 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 BCL7AQ4VC05 210 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 AARS2Q5JTZ9 985 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 METRNLQ641Q3 311 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 DUS1LQ6P1R4 473 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 ABRAXAS1Q6UWZ7 409 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 TMEM26Q6ZUK4 368 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 RAB11FIP2Q7L804 512 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 AVL9Q8NBF6 648 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 WDR36Q8NI36 951 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 ELMO1Q92556 727 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 ZNF669Q96BR6 464 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 FERD3LQ96RJ6 166 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 C19orf43Q9BQ61 176 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 NRSN2Q9GZP1 204 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 POLR1BQ9H9Y6 1135 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 XAB2Q9HCS7 855 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 IL1RAPL1Q9NZN1 696 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 AKAP7Q9P0M2 348 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 TMEM9Q9P0T7 183 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 MARCH4Q9P2E8 410 aaPredicted RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 PISDQ9UG56 409 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 ACSL5Q9ULC5 683 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 RIMKLBQ9ULI2 386 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 RAXQ9Y2V3 346 aa11.29□□□□□ -0.6
SUB1-213ENST00000515355 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
SUB1-213ENST00000515355 PTPRBP23467 1997 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 CCDC187A0A096LP49 1063 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 CCDC188H7C350 402 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 IFRD1O00458 451 aaPredicted RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 DNALI1O14645 258 aaPredicted RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 BANF1O75531 89 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 UBXN7O94888 489 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 FTH1P02794 183 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 PDX1P52945 283 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 UBE2IP63279 158 aaKnown RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 GPLD1P80108 840 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 C2orf54Q08AI8 447 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 DMPKQ09013 629 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 THOC5Q13769 683 aaKnown RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 DHX34Q14147 1143 aaKnown RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 GPR18Q14330 331 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 SEMA3AQ14563 771 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 ITIH4Q14624 930 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 BBS9Q3SYG4 887 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 AGAP9Q5VTM2 703 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 WASH2PQ6VEQ5 465 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 CERS6Q6ZMG9 384 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 PCGF5Q86SE9 256 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 SDCCAG8Q86SQ7 713 aaPredicted RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 CACTIN-AS1Q8N1I8 211 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 NAT8LQ8N9F0 302 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 MCUQ8NE86 351 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 GPR150Q8NGU9 434 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 RUNDC3BQ96NL0 473 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 TGM7Q96PF1 710 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 INSM2Q96T92 566 aaPredicted RBP11.28□□□□□ -0.6
SUB1-213ENST00000515355 CMKLR1Q99788 373 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 WASH6PQ9NQA3 447 aa11.28□□□□□ -0.6
SUB1-213ENST00000515355 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms