RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KRT222Q8N1A0 295 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 SDR16C5Q8N3Y7 309 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 RIBC1Q8N443 379 aaPredicted RBP20.62■□□□□ 0.89
LSM6-207ENST00000515311 FSTL5Q8N475 847 aaPredicted RBP20.62■□□□□ 0.89
LSM6-207ENST00000515311 LKAAEAR1Q8TD35 194 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 SMOC1Q9H4F8 434 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 EURLQ9NYK6 297 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 SPASTQ9UBP0 616 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 SLC23A2Q9UGH3 650 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 DMDP11532 3685 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 WDR87Q6ZQQ6 2873 aa20.62■□□□□ 0.89
LSM6-207ENST00000515311 A0A1B0GTQ1 180 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 HMX2A2RU54 273 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 RASGRF2O14827 1237 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 LIN7AO14910 233 aaPredicted RBP20.61■□□□□ 0.89
LSM6-207ENST00000515311 PIAS2O75928 621 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 KRT37O76014 449 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 ENGP17813 658 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 PBLDP30039 288 aaPredicted RBP20.61■□□□□ 0.89
LSM6-207ENST00000515311 CCR7P32248 378 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 TIAL1Q01085 375 aaKnown RBP eCLIP20.61■□□□□ 0.89
LSM6-207ENST00000515311 CTBSQ01459 385 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 TMED2Q15363 201 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 ELOCQ15369 112 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 PRRT3Q5FWE3 981 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 MROH9Q5TGP6 573 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 TCEAL6Q6IPX3 200 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 OTOAQ7RTW8 1153 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 DCLK2Q8N568 766 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 ZNF548Q8NEK5 533 aaPredicted RBP20.61■□□□□ 0.89
LSM6-207ENST00000515311 ACVR1CQ8NER5 493 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 EPS8L3Q8TE67 593 aaKnown RBP20.61■□□□□ 0.89
LSM6-207ENST00000515311 ASZ1Q8WWH4 475 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 ELMO1Q92556 727 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 TCEAL3Q969E4 200 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 MTBPQ96DY7 904 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 TSPAN17Q96FV3 270 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 GSDMCQ9BYG8 508 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 GAREM1Q9H706 876 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 POPDC3Q9HBV1 291 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 FSCN3Q9NQT6 498 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 KLC4Q9NSK0 619 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 DHRS7Q9Y394 339 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 ST14Q9Y5Y6 855 aa20.61■□□□□ 0.89
LSM6-207ENST00000515311 LNP1A1A4G5 178 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 APOA4P06727 396 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 SNRPAP09012 282 aaKnown RBP20.6■□□□□ 0.89
LSM6-207ENST00000515311 ITGB6P18564 788 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 SLC12A2P55011 1212 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 TAS2R39P59534 338 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 PLOD1Q02809 727 aaPredicted RBP20.6■□□□□ 0.89
LSM6-207ENST00000515311 ZNF844Q08AG5 666 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 RPA4Q13156 261 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 DNAJC3Q13217 504 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 USP10Q14694 798 aaKnown RBP20.6■□□□□ 0.89
LSM6-207ENST00000515311 SHBQ15464 509 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 CSRP2Q16527 193 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 PRAMEF14Q5SWL7 426 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 PLEKHS1Q5SXH7 462 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 METRNLQ641Q3 311 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 HDXQ7Z353 690 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 CROCCP2Q86T23 111 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 ZBTB2Q8N680 514 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 CD200R1Q8TD46 325 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 ANKRD7Q92527 254 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 ZIM3Q96PE6 472 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 GPR21Q99679 349 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 OLFM1Q99784 485 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 COG4Q9H9E3 785 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 TRMT6Q9UJA5 497 aaKnown RBP20.6■□□□□ 0.89
LSM6-207ENST00000515311 SLC39A10Q9ULF5 831 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 CSNK1G3Q9Y6M4 447 aa20.6■□□□□ 0.89
LSM6-207ENST00000515311 IQANK1A0A1B0GTG1 560 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SCAMP1O15126 338 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 AQP9O43315 295 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 FOXD2O60548 495 aaPredicted RBP20.59■□□□□ 0.89
LSM6-207ENST00000515311 STMN1P16949 149 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 EPHA8P29322 1005 aaPredicted RBP20.59■□□□□ 0.89
LSM6-207ENST00000515311 ATP5DP30049 168 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SLCO1A2P46721 670 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 NHLH1Q02575 133 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SPEM2Q0P670 501 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 BMPR2Q13873 1038 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 BOP1Q14137 746 aaKnown RBP20.59■□□□□ 0.89
LSM6-207ENST00000515311 GBX1Q14549 363 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 ZKSCAN8Q15776 578 aaPredicted RBP20.59■□□□□ 0.89
LSM6-207ENST00000515311 TTLL9Q3SXZ7 439 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SYTL3Q4VX76 610 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 XKR5Q6UX68 686 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 PIM3Q86V86 326 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 NRROSQ86YC3 692 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 CFAP206Q8IYR0 622 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 GIMAP7Q8NHV1 300 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 INPP5DQ92835 1189 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 GLMNQ92990 594 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 ISL2Q96A47 359 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 FAM136AQ96C01 138 aa20.59■□□□□ 0.89
LSM6-207ENST00000515311 SARS2Q9NP81 518 aaKnown RBP20.59■□□□□ 0.89
LSM6-207ENST00000515311 GALPQ9UBC7 116 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 434.8 ms