RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 PDIK1LQ8N165 341 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 WDR48Q8TAF3 677 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 STN1Q9H668 368 aaKnown RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 ATXN7L1Q9ULK2 861 aaPredicted RBP13.68□□□□□ -0.22
USP46-209ENST00000514536 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
USP46-209ENST00000514536 PRAMEF33A0A0G2JMD5 474 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 C17orf113A0A1B0GUU1 675 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 VIPP01282 170 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 OR56A5P0C7T3 313 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 PGAM1P18669 254 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 HALP42357 657 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 ARL4CP56559 192 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
USP46-209ENST00000514536 TUBB2AQ13885 445 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 NR1D2Q14995 579 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 RPE65Q16518 533 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 DUPD1Q68J44 220 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 XKR5Q6UX68 686 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 RBM44Q6ZP01 1051 aaKnown RBP13.67□□□□□ -0.22
USP46-209ENST00000514536 USP53Q70EK8 1073 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 IGDCC3Q8IVU1 814 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 DCBLD1Q8N8Z6 715 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 HM13Q8TCT9 377 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 CXorf40BQ96DE9 158 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 WWP1Q9H0M0 922 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 VPS37BQ9H9H4 285 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 ACSL5Q9ULC5 683 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
USP46-209ENST00000514536 FAM169AQ9Y6X4 670 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 RP1P56715 2156 aa13.67□□□□□ -0.22
USP46-209ENST00000514536 QSOX1O00391 747 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 ZW10O43264 779 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CSO75390 466 aaKnown RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 TCEA3O75764 348 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 FTH1P02794 183 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 ITGB6P18564 788 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CD1CP29017 333 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 ELK3P41970 407 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 THOC5Q13769 683 aaKnown RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 BRD3Q15059 726 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 HIF1AQ16665 826 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 LONRF1Q17RB8 773 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 NAPRTQ6XQN6 538 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 AVL9Q8NBF6 648 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 GPR150Q8NGU9 434 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 INSM2Q96T92 566 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 LRRC1Q9BTT6 524 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 COG4Q9H9E3 785 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 C20orf96Q9NUD7 363 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 WHRNQ9P202 907 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CFAP20Q9Y6A4 193 aaKnown RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 IGHV1OR21-1A0A087WYE8 117 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 IQCF5A8MTL0 148 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 F8W8V4 182 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 PRMT5O14744 637 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 NDC80O14777 642 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 GSTM1P09488 218 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 PPM1FP49593 454 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 SLC7A5Q01650 507 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 GSTM4Q03013 218 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 ZNF658BQ4V348 819 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 PTRHD1Q6GMV3 140 aaKnown RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 UNC5BQ8IZJ1 945 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP46-209ENST00000514536 ELMO1Q92556 727 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 C12orf66Q96MD2 445 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 TCF12Q99081 682 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 NAT9Q9BTE0 207 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.66□□□□□ -0.22
USP46-209ENST00000514536 RAB17Q9H0T7 212 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 RDH14Q9HBH5 336 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 CHMP2BQ9UQN3 213 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 USP24Q9UPU5 2620 aa13.66□□□□□ -0.22
USP46-209ENST00000514536 FRYQ5TBA9 3013 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 ZFHX4Q86UP3 3567 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
USP46-209ENST00000514536 TRABD2BA6NFA1 517 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 D6RAR5 112 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 TTC4O95801 387 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 SLC35G4P0C7Q5 338 aa13.65□□□□□ -0.22
USP46-209ENST00000514536 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms