RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 CCDC117Q8IWD4 279 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 RASGEF1CQ8N431 466 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 ZNF557Q8N988 423 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 CT55Q8WUE5 264 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 ARHGEF2Q92974 986 aaKnown RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 TTC17Q96AE7 1141 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 SDCCAG3Q96C92 435 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 HMCESQ96FZ2 354 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 SGSM3Q96HU1 749 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 MS4A14Q96JA4 679 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 PBKQ96KB5 322 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 WDR77Q9BQA1 342 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 GPATCH1Q9BRR8 931 aaKnown RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 SPON2Q9BUD6 331 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 ZMYND15Q9H091 742 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 MUC3BQ9H195 1237 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 MAGEH1Q9H213 219 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 RASSF1Q9NS23 344 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 DTLQ9NZJ0 730 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 COQ3Q9NZJ6 369 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 TTC7AQ9ULT0 858 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 ERVW-1Q9UQF0 538 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 R3HDM2Q9Y2K5 976 aaKnown RBP6.26□□□□□ -1.41
CLDND1-225ENST00000512147 HEY1Q9Y5J3 304 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 SAR1BQ9Y6B6 198 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 DOCK4Q8N1I0 1966 aa6.26□□□□□ -1.41
CLDND1-225ENST00000512147 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ARHGAP42A6NI28 874 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 A8MU76 341 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ESPNB1AK53 854 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 C1QTNF3-AMACRE9PGA6 284 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 J3KR12 359 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 DFFAO00273 331 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 CLDN4O14493 209 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 KDELR3O43731 214 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ZNF500O60304 480 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SNAP91O60641 907 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ZMPSTE24O75844 475 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 TJP3O95049 919 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 CD160O95971 181 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 MT-CO1P00395 513 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 FGGP02679 453 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 TUBB4AP04350 444 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ZNF28P17035 718 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 TCP1P17987 556 aaKnown RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SERPINB6P35237 376 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 CTSOP43234 321 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ARCN1P48444 511 aaKnown RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 NR2C2P49116 596 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 HK3P52790 923 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 RPS18P62269 152 aaKnown RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 GALNT2Q10471 571 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 BIRC2Q13490 618 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 IL10RAQ13651 578 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 HLTFQ14527 1009 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SIX1Q15475 284 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 C10orf62Q5T681 223 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SEL1L2Q5TEA6 688 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 B3GNTL1Q67FW5 361 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SEL1L3Q68CR1 1132 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 TMEM71Q6P5X7 295 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 B4GALNT4Q76KP1 1039 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 CREG2Q8IUH2 290 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 FAM46DQ8NEK8 389 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 DNAJB14Q8TBM8 379 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ACTL9Q8TC94 416 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 LRRN4Q8WUT4 740 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 HAUS1Q96CS2 278 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 OLFM3Q96PB7 478 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 FAM118BQ9BPY3 351 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ATP13A1Q9HD20 1204 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 NPDC1Q9NQX5 325 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-225ENST00000512147 SMARCAL1Q9NZC9 954 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 VPS28Q9UK41 221 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 ACTL7AQ9Y615 435 aa6.25□□□□□ -1.41
CLDND1-225ENST00000512147 TRIM64A6NGJ6 449 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 TRIM64BA6NI03 449 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 KDM4EB2RXH2 506 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 APOC4-APOC2K7ER74 178 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 KIF2AO00139 706 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 PDE2AO00408 941 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 SOCS6O14544 535 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 RAD51BO15315 384 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 MAFKO60675 156 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 SLC19A2O60779 497 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 PRAMEF11O60813 436 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 KIAA0754O94854 1291 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 PEX11BO96011 259 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 APOC2P02655 101 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 SRPRAP08240 638 aaKnown RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 MX2P20592 715 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 CCNCP24863 283 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 ETFBP38117 255 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 NNMTP40261 264 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 STK19P49842 368 aaPredicted RBP6.24□□□□□ -1.41
CLDND1-225ENST00000512147 TDGF1P3P51864 188 aa6.24□□□□□ -1.41
CLDND1-225ENST00000512147 PFN3P60673 137 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms