RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 PDP1Q9P0J1 537 aaPredicted RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 AGO1Q9UL18 857 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 TNPO3Q9Y5L0 923 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 A0A0U1RQS6 177 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 GNG14A0A1W2PPG7 69 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 FUOMA2VDF0 154 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 RFXANKO14593 260 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 SNPHO15079 494 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 FYNP06241 537 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 COL6A1P12109 1028 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 FUT4P22083 530 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 GPX3P22352 226 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 MLLT6P55198 1093 aaPredicted RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 C6orf183Q5T699 404 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 KCTD11Q693B1 232 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 FBXL22Q6P050 247 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 NCCRP1Q6ZVX7 275 aaPredicted RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 LIX1Q8N485 282 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 ZMIZ2Q8NF64 920 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 BRSK1Q8TDC3 778 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 IRGQQ8WZA9 623 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 MYRFLQ96LU7 910 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 NSMCE3Q96MG7 304 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 ADAMTS10Q9H324 1103 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 TFB2MQ9H5Q4 396 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 RMI1Q9H9A7 625 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 ITM2CQ9NQX7 267 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 KRT84Q9NSB2 600 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 DFNA5O60443 496 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 EPB42P16452 691 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 CSTF3Q12996 717 aaKnown RBP14.7□□□□□ -0.06
USP38-202ENST00000510377 PTGR1Q14914 329 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 BORAQ6PGQ7 559 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 PRR23BQ6ZRT6 265 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 CNIH3Q8TBE1 160 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 HERC2P3Q9BVR0 1158 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 AASSQ9UDR5 926 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 DUSP12Q9UNI6 340 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 SBF2Q86WG5 1849 aa14.7□□□□□ -0.06
USP38-202ENST00000510377 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 GABRDO14764 452 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ALDH3A2P51648 485 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 RELAQ04206 551 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 RUNX1T1Q06455 604 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 MAD2L1Q13257 205 aaPredicted RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 SPRYD7Q5W111 196 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 RANBP10Q6VN20 620 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP38-202ENST00000510377 SYVN1Q86TM6 617 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 APOLD1Q96LR9 279 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ACBD6Q9BR61 282 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 SEZ6LQ9BYH1 1024 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 LHPPQ9H008 270 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 NT5C1B-RDH14C9J2C7 533 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 H0YJX3 145 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 KERAO60938 352 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 PGLSO95336 258 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 MED26O95402 600 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 SNAI1O95863 264 aaPredicted RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 SBK3P0C264 359 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 RPL9P32969 192 aaKnown RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 C6orf136Q5SQH8 315 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 BLOC1S3Q6QNY0 202 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 SYT12Q8IV01 421 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 PPP1R14BQ96C90 147 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ITCHQ96J02 903 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 PANX1Q96RD7 426 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 AARSD1Q9BTE6 412 aaKnown RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 MARCH7Q9H992 704 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 C8orf4Q9NR00 106 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ZNF99A8MXY4 864 aaPredicted RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 UBFD1O14562 309 aaKnown RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 PTGESO14684 152 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 OR1I1O60431 355 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ABCB7O75027 752 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 MZF1P28698 734 aaPredicted RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 SPANXN2Q5MJ10 180 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 SULT1C3Q6IMI6 304 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 TRAF7Q6Q0C0 670 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 ADAMTSL2Q86TH1 951 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 OR52B6Q8NGF0 335 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 OR9Q1Q8NGQ5 310 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 S100ZQ8WXG8 99 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 OTULINQ96BN8 352 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 IL12RB2Q99665 862 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 MUC13Q9H3R2 512 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 LRTM1Q9HBL6 345 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 TRMT13Q9NUP7 481 aaKnown RBP14.69□□□□□ -0.06
USP38-202ENST00000510377 MIOSQ9NXC5 875 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 DNAJB9Q9UBS3 223 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 GNPTGQ9UJJ9 305 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 VPS4AQ9UN37 437 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 PCDHB3Q9Y5E6 796 aa14.69□□□□□ -0.06
USP38-202ENST00000510377 TULP3O75386 442 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 GNPDA1P46926 289 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 FLT3LGP49771 235 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 HLCSP50747 726 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 SCAPQ12770 1279 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 NHSL2Q5HYW2 709 aa14.68□□□□□ -0.06
USP38-202ENST00000510377 ARMC4Q5T2S8 1044 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms