RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 BRCC3P46736 316 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 PEX3P56589 373 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GAD2Q05329 585 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 LRRC63Q05C16 580 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GRSF1Q12849 480 aaKnown RBP eCLIP5.01□□□□□ -1.61
NEK1-204ENST00000509912 RUNX3Q13761 415 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 RUNDC3AQ59EK9 446 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GLRA4Q5JXX5 417 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 C16orf87Q6PH81 154 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 TSSK4Q6SA08 328 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 INTS8Q75QN2 995 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 LINC01356Q8N9X3 169 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CD101Q93033 1021 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 LMLNQ96KR4 655 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GSDMAQ96QA5 445 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 PRR25Q96S07 402 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 PNKPQ96T60 521 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 DDX50Q9BQ39 737 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 TRIM9Q9C026 710 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 KLHL4Q9C0H6 718 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 XYLT2Q9H1B5 865 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 MEGF9Q9H1U4 602 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CXorf56Q9H5V9 222 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CYP4F11Q9HBI6 524 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 PEMTQ9UBM1 199 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 ARHGEF17Q96PE2 2063 aaPredicted RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 TARSL2A2RTX5 802 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 FOXS1O43638 330 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 KLRC4O43908 158 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 HNRNPCL1O60812 293 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 CLEC3BP05452 202 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 APOA4P06727 396 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 SRPRAP08240 638 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 TEAD1P28347 426 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GDI1P31150 447 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 MCM7P33993 719 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 AFF3P51826 1226 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 SLURP1P55000 103 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 UFM1P61960 85 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 DYRK1AQ13627 763 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 KNOP1Q1ED39 458 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 AWAT1Q58HT5 328 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CBWD5Q5RIA9 395 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CCDC144NLQ6NUI1 221 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 TCTN3Q6NUS6 607 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 GPBP1Q86WP2 473 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 ZDHHC17Q8IUH5 632 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 XXYLT1Q8NBI6 393 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 MNS1Q8NEH6 495 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 TOR1AIP2Q8NFQ8 470 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 C2CD4CQ8TF44 421 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 NOC3LQ8WTT2 800 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 ATP6V1E2Q96A05 226 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 CCDC47Q96A33 483 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 PGAP3Q96FM1 320 aaPredicted RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 KLHL15Q96M94 604 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 MSTO1Q9BUK6 570 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 TRIM31Q9BZY9 425 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 XPO4Q9C0E2 1151 aaKnown RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 SCAND2PQ9GZW5 306 aaPredicted RBP5.01□□□□□ -1.61
NEK1-204ENST00000509912 POLR1BQ9H9Y6 1135 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 LMAN1LQ9HAT1 526 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 KLQ9UEF7 1012 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 ZNF711Q9Y462 761 aa5.01□□□□□ -1.61
NEK1-204ENST00000509912 FAM237BA0A1B0GVD1 139 aa5□□□□□ -1.61
NEK1-204ENST00000509912 BCLAF3A2AJT9 711 aaKnown RBP5□□□□□ -1.61
NEK1-204ENST00000509912 HEPACAM2A8MVW5 462 aa5□□□□□ -1.61
NEK1-204ENST00000509912 H0YHG0 523 aa5□□□□□ -1.61
NEK1-204ENST00000509912 SPRY2O43597 315 aa5□□□□□ -1.61
NEK1-204ENST00000509912 ZNF189O75820 626 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 WDR47O94967 919 aa5□□□□□ -1.61
NEK1-204ENST00000509912 PROS1P07225 676 aa5□□□□□ -1.61
NEK1-204ENST00000509912 IL6RP08887 468 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 HOXC4P09017 264 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 TBXAS1P24557 533 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 ARPP19P56211 112 aa5□□□□□ -1.61
NEK1-204ENST00000509912 VAMP2P63027 116 aa5□□□□□ -1.61
NEK1-204ENST00000509912 SARNPP82979 210 aaKnown RBP5□□□□□ -1.61
NEK1-204ENST00000509912 E2F1Q01094 437 aa5□□□□□ -1.61
NEK1-204ENST00000509912 OVGP1Q12889 678 aa5□□□□□ -1.61
NEK1-204ENST00000509912 GAB1Q13480 694 aa5□□□□□ -1.61
NEK1-204ENST00000509912 MAMLD1Q13495 774 aa5□□□□□ -1.61
NEK1-204ENST00000509912 ACOX1Q15067 660 aa5□□□□□ -1.61
NEK1-204ENST00000509912 SEC23BQ15437 767 aa5□□□□□ -1.61
NEK1-204ENST00000509912 CAVIN1Q6NZI2 390 aaKnown RBP5□□□□□ -1.61
NEK1-204ENST00000509912 GPT2Q8TD30 523 aa5□□□□□ -1.61
NEK1-204ENST00000509912 MRPS31Q92665 395 aaKnown RBP5□□□□□ -1.61
NEK1-204ENST00000509912 TCEAL4Q96EI5 215 aa5□□□□□ -1.61
NEK1-204ENST00000509912 ZNF419Q96HQ0 510 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 DHTKD1Q96HY7 919 aaPredicted RBP5□□□□□ -1.61
NEK1-204ENST00000509912 HSFY1Q96LI6 401 aa5□□□□□ -1.61
NEK1-204ENST00000509912 CXCL16Q9H2A7 254 aa5□□□□□ -1.61
NEK1-204ENST00000509912 GLOD4Q9HC38 313 aa5□□□□□ -1.61
NEK1-204ENST00000509912 THAP1Q9NVV9 213 aa5□□□□□ -1.61
NEK1-204ENST00000509912 ALKBH4Q9NXW9 302 aa5□□□□□ -1.61
NEK1-204ENST00000509912 TTLL3Q9Y4R7 772 aa5□□□□□ -1.61
NEK1-204ENST00000509912 KCTD3Q9Y597 815 aa5□□□□□ -1.61
NEK1-204ENST00000509912 A0A087WWV3 80 aa5□□□□□ -1.61
NEK1-204ENST00000509912 VPS37CA5D8V6 355 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms