RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NLRP9Q7RTR0 991 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 LILRA3Q8N6C8 439 aaPredicted RBP15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 CLDN19Q8N6F1 224 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 ZNF248Q8NDW4 579 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 SGSM3Q96HU1 749 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 EPB41L1Q9H4G0 881 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 SMARCAL1Q9NZC9 954 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 PISDQ9UG56 409 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 SNX12Q9UMY4 172 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 PSMD13Q9UNM6 376 aa15.81■□□□□ 0.12
PDLIM5-212ENST00000509333 PTPRQQ9UMZ3 2332 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 BPTFQ12830 3046 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 CFAP99D6REC4 459 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 CES2O00748 559 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 ZNF185O15231 689 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 DUX1O43812 170 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 KRT14P02533 472 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 POLBP06746 335 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 JMJD7P0C870 316 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 FOXN2P32314 431 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 HALP42357 657 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 MAGEA6P43360 314 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 PRLHRP49683 370 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 PCBP4P57723 403 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 SESN2P58004 480 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 CDK16Q00536 496 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 DBN1Q16643 649 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 LRRC8BQ6P9F7 803 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 ZNF534Q76KX8 674 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 TRIM48Q8IWZ4 208 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 SPACA3Q8IXA5 215 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 RBM12BQ8IXT5 1001 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 SPDYE1Q8NFV5 336 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 PEX13Q92968 403 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 USP7Q93009 1102 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 CXorf40BQ96DE9 158 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 NAP1L3Q99457 506 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 CCM2Q9BSQ5 444 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 DPH1Q9BZG8 443 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 B3GNT4Q9C0J1 378 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 POT1Q9NUX5 634 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 TCAF1Q9Y4C2 921 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 PRSS21Q9Y6M0 314 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 ADAMTS20P59510 1910 aa15.8■□□□□ 0.12
PDLIM5-212ENST00000509333 A8MU76 341 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 UBXN7O94888 489 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 GOT2P00505 430 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 TYRP1P17643 537 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 TPSB2P20231 275 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 PBLDP30039 288 aaPredicted RBP15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 BASP1P80723 227 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 TLE3Q04726 772 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 GPR18Q14330 331 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 ITIH4Q14624 930 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 TPSAB1Q15661 275 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 AGBL5Q8NDL9 886 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 OR4L1Q8NH43 312 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 ZFPM2Q8WW38 1151 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 NAF1Q96HR8 494 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 WWP1Q9H0M0 922 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 OCIAD1Q9NX40 245 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 BFARQ9NZS9 450 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 AKAP7Q9P0M2 348 aaPredicted RBP15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 ACSL6Q9UKU0 697 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 PYCARDQ9ULZ3 195 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 LHX6Q9UPM6 363 aa15.79■□□□□ 0.12
PDLIM5-212ENST00000509333 C9orf172C9J069 976 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 AP3B1O00203 1094 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 PGRMC1O00264 195 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 AP2A2O94973 939 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 C9P02748 559 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 AMD1P17707 334 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 CSTF2P33240 577 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■□□□ 13.9
PDLIM5-212ENST00000509333 NSG1P42857 185 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 MAPK9P45984 424 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 CRADDP78560 199 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 GPS1Q13098 491 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 KCNJ11Q14654 390 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 SNAP47Q5SQN1 464 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 CCDC137Q6PK04 289 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 PLXDC1Q8IUK5 500 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 OR6P1Q8NGX9 317 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 CRELD1Q96HD1 420 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 TAAR9Q96RI9 348 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 KIFC1Q9BW19 673 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 TREX1Q9NSU2 369 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 EPHA6Q9UF33 1036 aa15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 CFAP20Q9Y6A4 193 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-212ENST00000509333 FAM208BQ5VWN6 2430 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 B4E171 279 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 OR1I1O60431 355 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 MTHFD1P11586 935 aaKnown RBP15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 NMBRP28336 390 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 PDHA2P29803 388 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 TSPAN7P41732 249 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 PPM1FP49593 454 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 MAPK10P53779 464 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 LYPLAL1Q5VWZ2 237 aa15.77■□□□□ 0.12
PDLIM5-212ENST00000509333 ANKRD22Q5VYY1 191 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms