RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DLGAP3O95886 979 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 FTCDO95954 541 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 C9P02748 559 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 ZNF28P17035 718 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 OAS2P29728 719 aaKnown RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 PBLDP30039 288 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 STAT5AP42229 794 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 CDKN1CP49918 316 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 COPS2P61201 443 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 SH3BP2P78314 561 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 TMPRSS15P98073 1019 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 KLF1Q13351 362 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 GTF2H3Q13889 308 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 GPR18Q14330 331 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 NFE2L1Q14494 772 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 KCTD19Q17RG1 926 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 TMEM220Q6QAJ8 160 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 DET1Q7L5Y6 550 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 RBM12BQ8IXT5 1001 aaKnown RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 SPC24Q8NBT2 197 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 DDHD1Q8NEL9 900 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 VAT1Q99536 393 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 TRABDQ9H4I3 376 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 FAM96AQ9H5X1 160 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 SLC40A1Q9NP59 571 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 ZNF71Q9NQZ8 489 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 POT1Q9NUX5 634 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 PIH1D1Q9NWS0 290 aaKnown RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 ANKMY1Q9P2S6 941 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 TRHDEQ9UKU6 1024 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 PSMD13Q9UNM6 376 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 CFAP20Q9Y6A4 193 aaKnown RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 USP9YO00507 2555 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 CCDC66A2RUB6 948 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 KCNJ13O60928 360 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 POP7O75817 140 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 UBXN7O94888 489 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 NTRK1P04629 796 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 TCN2P20062 427 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 SEPHS1P49903 392 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 GEMP55040 296 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 NAP1L1P55209 391 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 DMPKQ09013 629 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 UBAP2LQ14157 1087 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 DEFB109BQ30KR1 87 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 LACTB2Q53H82 288 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 AGAP9Q5VTM2 703 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 ZDHHC20Q5W0Z9 365 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 KCTD11Q693B1 232 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 DARS2Q6PI48 645 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 CERS6Q6ZMG9 384 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 CDKL3Q8IVW4 592 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 TAB3Q8N5C8 712 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 GDAP1Q8TB36 358 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 DTX3LQ8TDB6 740 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 ABHD17AQ96GS6 310 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 C9orf72Q96LT7 481 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 SPATA13Q96N96 652 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 TTC25Q96NG3 672 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 TGM7Q96PF1 710 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 BAG1Q99933 345 aaPredicted RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 FSD1LQ9BXM9 530 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 ULBP3Q9BZM4 244 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 ZCCHC2Q9C0B9 1178 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 SMOXQ9NWM0 555 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 HACD3Q9P035 362 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 FAM8A1Q9UBU6 413 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 EFR3BQ9Y2G0 817 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.68□□□□□ -0.7
RNF4-212ENST00000509258 RPS6KL1Q9Y6S9 549 aa10.68□□□□□ -0.7
RNF4-212ENST00000509258 SPTAN1Q13813 2472 aaKnown RBP10.68□□□□□ -0.7
RNF4-212ENST00000509258 STX7O15400 261 aaKnown RBP10.67□□□□□ -0.7
RNF4-212ENST00000509258 LDB2O43679 373 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 TIAF1O95411 115 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 PRAMEF1O95521 474 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 MT-ND3P03897 115 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 LPOP22079 712 aaPredicted RBP10.67□□□□□ -0.7
RNF4-212ENST00000509258 IDSP22304 550 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 F8A1P23610 371 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 HALP42357 657 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 RWDD2BP57060 319 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 FOXM1Q08050 763 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 IL11RAQ14626 422 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 TAF1AQ15573 450 aaPredicted RBP10.67□□□□□ -0.7
RNF4-212ENST00000509258 RPE65Q16518 533 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 FNBP1LQ5T0N5 605 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 CCDC181Q5TID7 509 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 C16orf46Q6P387 395 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 KLHL35Q6PF15 583 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 WASH2PQ6VEQ5 465 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 FAM92BQ6ZTR7 304 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 KIAA1328Q86T90 577 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 PRUNE1Q86TP1 453 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 FAM71DQ8N9W8 422 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
RNF4-212ENST00000509258 BRSK1Q8TDC3 778 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms