RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TXNRD3NBQ6F5E7 133 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 LCN10Q6JVE6 187 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 TMC3Q7Z5M5 1100 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 ST6GALNAC3Q8NDV1 305 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 GPR150Q8NGU9 434 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 FAM71BQ8TC56 605 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 CPT1BQ92523 772 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 IP6K3Q96PC2 410 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 VPS35Q96QK1 796 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 XPO4Q9C0E2 1151 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 MAGEE1Q9HCI5 957 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 MRPL47Q9HD33 250 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 MYO6Q9UM54 1294 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 BTRCQ9Y297 605 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 TTLL3Q9Y4R7 772 aa9.17□□□□□ -0.94
NEDD9-211ENST00000508546 COPG1Q9Y678 874 aaKnown RBP9.17□□□□□ -0.94
NEDD9-211ENST00000508546 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 MTX2O75431 263 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ALPPP05187 535 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 MYBL1P10243 752 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 SLC25A11Q02978 314 aaKnown RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 UBXN1Q04323 297 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 CDK18Q07002 472 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TMEM115Q12893 351 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ABRQ12979 859 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ATP1A4Q13733 1029 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 PIGHQ14442 188 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 GSE1Q14687 1217 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 MYBPC3Q14896 1274 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 PLCL1Q15111 1095 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 RPE65Q16518 533 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 CCDC122Q5T0U0 273 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TMTC4Q5T4D3 741 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 LYPLAL1Q5VWZ2 237 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 NCBP2-AS2Q69YL0 99 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 FAM198BQ6UWH4 519 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 GDF7Q7Z4P5 450 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 RAB43Q86YS6 212 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TRAPPC5Q8IUR0 188 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 SYTL1Q8IYJ3 562 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 BRSK1Q8TDC3 778 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ZFPM2Q8WW38 1151 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 INPP5DQ92835 1189 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF653Q96CK0 615 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TRIM11Q96F44 468 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 FANCEQ9HB96 536 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 SYTL2Q9HCH5 934 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 HRASLS2Q9NWW9 162 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TRIM10Q9UDY6 481 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
NEDD9-211ENST00000508546 TMPRSS11EQ9UL52 423 aa9.16□□□□□ -0.94
NEDD9-211ENST00000508546 HEATR9A2RTY3 570 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 LRRC10BA6NIK2 292 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 IPO13O94829 963 aaKnown RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 IGHEP01854 428 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 BPIP17213 487 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 HADHAP40939 763 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 CD86P42081 329 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 ARSEP51690 589 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 RAPSNQ13702 412 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 GALNT3Q14435 633 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 KRT81Q14533 505 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 NCF4Q15080 339 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 PRAMEF17Q5VTA0 474 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 FAM69BQ5VUD6 431 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 Q6ZS92 163 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 AMZ2Q86W34 360 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 OOSP2Q86WS3 158 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 TM9SF4Q92544 642 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 HDAC11Q96DB2 347 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 CLIP3Q96DZ5 547 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 FER1L6-AS2Q96M78 137 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 SRPK1Q96SB4 655 aaKnown RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 DHRS4Q9BTZ2 278 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF552Q9H707 407 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 AGPAT4Q9NRZ5 378 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 PCMTD2Q9NV79 361 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 FANCLQ9NW38 375 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 SHOC2Q9UQ13 582 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 NTNG1Q9Y2I2 539 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 PADI2Q9Y2J8 665 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 ZNF711Q9Y462 761 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 PCDHGA10Q9Y5H3 936 aa9.15□□□□□ -0.94
NEDD9-211ENST00000508546 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-211ENST00000508546 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
NEDD9-211ENST00000508546 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms