RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 RASGEF1CQ8N431 466 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 CCDC89Q8N998 374 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 FAM71DQ8N9W8 422 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 CCDC110Q8TBZ0 833 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 COX14Q96I36 57 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 VPS35Q96QK1 796 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 CTRCQ99895 268 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 TBL1YQ9BQ87 522 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 RIOK2Q9BVS4 552 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 ASPSCR1Q9BZE9 553 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 ZCCHC2Q9C0B9 1178 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 DPEP2Q9H4A9 486 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 SIDT1Q9NXL6 827 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 UBP1Q9NZI7 540 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 TLK1Q9UKI8 766 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 ZNF148Q9UQR1 794 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 KCTD3Q9Y597 815 aa9.07□□□□□ -0.96
UBE2D3-223ENST00000508249 GOLGA6L10A0A0M3HER8 536 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 MKRN2OSH3BPM6 223 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 VEGFDO43915 354 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 CEP104O60308 925 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 STK17BO94768 372 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 SOD1P00441 154 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 CEACAM5P06731 702 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ZNF28P17035 718 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 TCP1P17987 556 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 TCN2P20062 427 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 MAP4P27816 1152 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ALDH4A1P30038 563 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ADRA1AP35348 466 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 SPAM1P38567 509 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 HADHAP40939 763 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 MC2RQ01718 297 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 TAF1AQ15573 450 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 LONRF2Q1L5Z9 754 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 DCAF12Q5T6F0 453 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ARMC3Q5W041 872 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 C16orf46Q6P387 395 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 B4GALNT4Q76KP1 1039 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 KDELC2Q7Z4H8 507 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ARHGAP22Q7Z5H3 698 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 FAM129CQ86XR2 697 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 GALNT13Q8IUC8 556 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 REXO1L1PQ8IX06 675 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 TTC30BQ8N4P2 665 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 BRSK1Q8TDC3 778 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 BLOC1S5Q8TDH9 187 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 ZDHHC1Q8WTX9 485 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 SCAMP4Q969E2 229 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 RNF31Q96EP0 1072 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 OR2M4Q96R27 311 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 TMEM121Q9BTD3 319 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 FICDQ9BVA6 458 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 SPATA16Q9BXB7 569 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 MLXIPLQ9NP71 852 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 CASS4Q9NQ75 786 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 EIF2B3Q9NR50 452 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 AKAP7Q9P0M2 348 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 IL17CQ9P0M4 197 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 CD84Q9UIB8 345 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 SHOC2Q9UQ13 582 aa9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
UBE2D3-223ENST00000508249 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 TTLL8A6PVC2 850 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 E7EVH7 732 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 PGRMC1O00264 195 aaKnown RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 STX7O15400 261 aaKnown RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 KCNJ13O60928 360 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 RFPL1O75677 317 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SUN1O94901 812 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 IFNB1P01574 187 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SLC2A4P14672 509 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 BPIP17213 487 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 AK4P27144 223 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 GPR3P46089 330 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 CDK16Q00536 496 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 CDH17Q12864 832 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SEMA5AQ13591 1074 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 GTF2H3Q13889 308 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SEPT6Q14141 434 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SIX1Q15475 284 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 LDLRAP1Q5SW96 308 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 KCTD11Q693B1 232 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 APLFQ8IW19 511 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SLC25A41Q8N5S1 370 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 ACTRT1Q8TDG2 376 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 HEXDCQ8WVB3 486 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 PEX13Q92968 403 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 GLYATL1Q969I3 302 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 KIAA1143Q96AT1 154 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 TEFMQ96QE5 360 aaKnown RBP9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 WDR24Q96S15 920 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 FAM118BQ9BPY3 351 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 TRIM39Q9HCM9 518 aa9.05□□□□□ -0.96
UBE2D3-223ENST00000508249 SMOXQ9NWM0 555 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms