RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NPSR1Q6W5P4 371 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 RAB11FIP2Q7L804 512 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 EFL1Q7Z2Z2 1120 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZBTB46Q86UZ6 589 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 METTL23Q86XA0 190 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 KRT73Q86Y46 540 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PPIL6Q8IXY8 311 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZDHHC14Q8IZN3 488 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NIPA2Q8N8Q9 360 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC24A4Q8NFF2 622 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NANPQ8TBE9 248 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SFT2D1Q8WV19 159 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ASB9Q96DX5 294 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LURAP1Q96LR2 239 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ILKAPQ9H0C8 392 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF700Q9H0M5 742 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CRTAC1Q9NQ79 661 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CATSPERZQ9NTU4 200 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NUDT15Q9NV35 164 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC23A1Q9UHI7 598 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 FBXL21Q9UKT6 434 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 KCNJ14Q9UNX9 436 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 USP6P35125 1406 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 LRP6O75581 1613 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 E5RJQ4 531 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 H0YCG3 227 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 BTN3A3O00478 584 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 AP3D1O14617 1153 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 AIM2O14862 343 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC30A4O14863 429 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 PAPSS1O43252 624 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 PAGE1O75459 146 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 GP1BAP07359 652 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 STSP08842 583 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 HNRNPLP14866 589 aaKnown RBP eCLIP10.69□□□□□ -0.75e-8■■■□□ 14.7
PDLIM5-210ENST00000508216 ATF2P15336 505 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 NELFEP18615 380 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 MSH3P20585 1137 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 MX2P20592 715 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 KCNA5P22460 613 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 PTBP1P26599 531 aaKnown RBP eCLIP10.69□□□□□ -0.79e-7■■■■■ 28.1
PDLIM5-210ENST00000508216 KIR3DL2P43630 455 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ASIC1P78348 528 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 SP2Q02086 613 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 FADDQ13158 208 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 UBAP2LQ14157 1087 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 PRR16Q569H4 304 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 TMEM31Q5JXX7 168 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 SSX9Q7RTT3 188 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF571Q7Z3V5 609 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 SMG8Q8ND04 991 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 CHDHQ8NE62 594 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 BHLHE22Q8NFJ8 381 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ALG3Q92685 438 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 RIT1Q92963 219 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF558Q96NG5 402 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF300Q96RE9 604 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 PKP4Q99569 1192 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 ZBTB18Q99592 522 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 COPS4Q9BT78 406 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 TBCDQ9BTW9 1192 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC25A23Q9BV35 468 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 TTYH1Q9H313 450 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 BOLA2Q9H3K6 86 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 GORASP2Q9H8Y8 452 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 BACE2Q9Y5Z0 518 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 CSADQ9Y600 493 aa10.69□□□□□ -0.7
PDLIM5-210ENST00000508216 TMEM2Q9UHN6 1383 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 hCG_1807616A0A1W2PRN6 198 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CIB4A0PJX0 185 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 C9orf170A2RU37 121 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 MOXD2PA6NHM9 499 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 OR6C70A6NIJ9 312 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 A8MXK9 166 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 E7ENX8 843 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 TRAF5O00463 557 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 NOP56O00567 594 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 PHYHO14832 338 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 FSCN2O14926 492 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 OGTO15294 1046 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CLDN3O15551 220 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ADAM12O43184 909 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 GPAA1O43292 621 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 GRIN3BO60391 1043 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 TPOP07202 933 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 ZDHHC11BP0C7U3 371 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 MYCLP12524 364 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 COX4I1P13073 169 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 CBR1P16152 277 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 BGNP21810 368 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 GGT5P36269 586 aa10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 POLR2IP36954 125 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-210ENST00000508216 GPR3P46089 330 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms