RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 NIPAL4Q0D2K0 466 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 ILF3Q12906 894 aaKnown RBP eCLIP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LRP8Q14114 963 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 TFDP2Q14188 446 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 SLC14A2Q15849 920 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 C14orf28Q4W4Y0 310 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LRRC66Q68CR7 880 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 DENND2CQ68D51 928 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LYPD4Q6UWN0 246 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 ASRGL1Q7L266 308 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 TMC3Q7Z5M5 1100 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 TSPAN33Q86UF1 283 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 PELI3Q8N2H9 469 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 ARL14Q8N4G2 192 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 CNTD1Q8N815 330 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 KYQ8NBH2 561 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 B4GALNT2Q8NHY0 566 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 MAGOHBQ96A72 148 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 TMEM159Q96B96 161 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 CCDC97Q96F63 343 aaPredicted RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 IMP4Q96G21 291 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 ATXN7L3BQ96GX2 97 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LIN37Q96GY3 246 aaPredicted RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 OLFM3Q96PB7 478 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 GFM1Q96RP9 751 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 SRPK1Q96SB4 655 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LGMNQ99538 433 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 MLPHQ9BV36 600 aaPredicted RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 GSDMCQ9BYG8 508 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 DPH1Q9BZG8 443 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 CDH19Q9H159 772 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 SLC25A51Q9H1U9 297 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LRRN3Q9H3W5 708 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 DPEP2Q9H4A9 486 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 DCLRE1BQ9H816 532 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 RNPEPL1Q9HAU8 725 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 THSD1Q9NS62 852 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 LRIT1Q9P2V4 623 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 TRIM10Q9UDY6 481 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 MTRF1LQ9UGC7 380 aaKnown RBP7.95□□□□□ -1.14
SCN1A-207ENST00000507401 CHKBQ9Y259 395 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 HEY1Q9Y5J3 304 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 ALG6Q9Y672 507 aa7.95□□□□□ -1.14
SCN1A-207ENST00000507401 COL27A1Q8IZC6 1860 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCDC187A0A096LP49 1063 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 A0A1W2PQM1 296 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 POM121CA8CG34 1229 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 KCNK1O00180 336 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RGS16O15492 202 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 MTSS1O43312 755 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 MAP3K6O95382 1288 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CLDN7O95471 211 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 FGF1P05230 155 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 MMP2P08253 660 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 LINGO3P0C6S8 592 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCDC166P0CW27 439 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CPA3P15088 417 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 COMTP21964 271 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCKBRP32239 447 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ADCY8P40145 1251 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 GPR3P46089 330 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SPINT3P49223 89 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 PSMD7P51665 324 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 UCNP55089 124 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NCALDP61601 193 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCL7P80098 99 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SLC7A5Q01650 507 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 AP1B1Q10567 949 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SQSTM1Q13501 440 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NR1D2Q14995 579 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 PTPRRQ15256 657 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 TEX44Q53QW1 395 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RAET1GQ6H3X3 334 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ZNF438Q7Z4V0 828 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NT5DC3Q86UY8 548 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NRROSQ86YC3 692 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RCOR2Q8IZ40 523 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RASGEF1CQ8N431 466 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SVOPQ8N4V2 548 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 LSM14AQ8ND56 463 aaKnown RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCL4L1Q8NHW4 92 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 NCSTNQ92542 709 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 SCAMP4Q969E2 229 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 CCDC74AQ96AQ1 378 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 TADA1Q96BN2 335 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 PRR11Q96HE9 360 aaPredicted RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 COX14Q96I36 57 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RBM41Q96IZ5 413 aaKnown RBP7.94□□□□□ -1.14
SCN1A-207ENST00000507401 TMEM74Q96NL1 305 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 KRT12Q99456 494 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 FMO2Q99518 471 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 STRADBQ9C0K7 418 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 YIPF3Q9GZM5 350 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 LRMDAQ9H2I8 198 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 FAM83DQ9H4H8 585 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 PRORYQ9H606 182 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 RMI1Q9H9A7 625 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 MAGEE1Q9HCI5 957 aa7.94□□□□□ -1.14
SCN1A-207ENST00000507401 ASCL3Q9NQ33 180 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms