RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 NADKO95544 446 aaPredicted RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 EML2O95834 649 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 EIF2S1P05198 315 aaKnown RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 HSPA1AP0DMV8 641 aaKnown RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 HSPA1BP0DMV9 641 aaKnown RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 DPEP1P16444 411 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 NFKBIAP25963 317 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 CEACAM8P31997 349 aaPredicted RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 CDH11P55287 796 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 PRKAA1Q13131 559 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 TPRG1Q6ZUI0 275 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 GALNT13Q8IUC8 556 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 DNAJC22Q8N4W6 341 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 PPHLN1Q8NEY8 458 aaKnown RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 GMPPAQ96IJ6 420 aaPredicted RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 EGFL8Q99944 293 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 ZNF71Q9NQZ8 489 aaPredicted RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 ATAD3AQ9NVI7 634 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 BARHL2Q9NY43 387 aa3.56□□□□□ -1.84
LINC00616-202ENST00000505874 C9orf78Q9NZ63 289 aaPredicted RBP3.56□□□□□ -1.84
LINC00616-202ENST00000505874 TMEM8BA6NDV4 472 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 ZNF197O14709 1029 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 TMCC2O75069 709 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 CCNDBP1O95273 360 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 TPOP07202 933 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 SP100P23497 879 aaPredicted RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 PSMC4P43686 418 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 BMXP51813 675 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 LMO4P61968 165 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 GKAP1Q5VSY0 366 aaPredicted RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 PWWP2BQ6NUJ5 590 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 KLC3Q6P597 504 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 NCEH1Q6PIU2 408 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 GPALPP1Q8IXQ4 340 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 HACE1Q8IYU2 909 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 PDILTQ8N807 584 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 L3MBTL4Q8NA19 623 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 MORC4Q8TE76 937 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 ARHGEF2Q92974 986 aaKnown RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 VGLL1Q99990 258 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 RTP3Q9BQQ7 232 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 DCTN5Q9BTE1 182 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 HGH1Q9BTY7 390 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 DENND2DQ9H6A0 471 aaPredicted RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 SMC4Q9NTJ3 1288 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 TRMT1Q9NXH9 659 aaKnown RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 TMEM181Q9P2C4 612 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 KLHL8Q9P2G9 620 aaPredicted RBP3.55□□□□□ -1.84
LINC00616-202ENST00000505874 GTF2A1LQ9UNN4 478 aa3.55□□□□□ -1.84
LINC00616-202ENST00000505874 H7C423 109 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 FRMD6-AS1P0C7T7 363 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 TMEM11P17152 192 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 WNT5AP41221 380 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 RPS18P62269 152 aaKnown RBP3.54□□□□□ -1.84
LINC00616-202ENST00000505874 PPP2R2BQ00005 443 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 SP3Q02447 781 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 G3BP1Q13283 466 aaKnown RBP eCLIP3.54□□□□□ -1.84
LINC00616-202ENST00000505874 CLEC17AQ6ZS10 378 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 ZNF440Q8IYI8 595 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 SCML4Q8N228 414 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 ZNF383Q8NA42 475 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 PCYOX1LQ8NBM8 494 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 RFFLQ8WZ73 363 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 ZNF582Q96NG8 517 aaPredicted RBP3.54□□□□□ -1.84
LINC00616-202ENST00000505874 DDOQ99489 341 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 SLA2Q9H6Q3 261 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 OLFML3Q9NRN5 406 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 PLCXD1Q9NUJ7 323 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 SLC7A7Q9UM01 511 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 MTMR6Q9Y217 621 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 EXOGQ9Y2C4 368 aaKnown RBP3.54□□□□□ -1.84
LINC00616-202ENST00000505874 PIAS3Q9Y6X2 628 aa3.54□□□□□ -1.84
LINC00616-202ENST00000505874 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 LIPT2A6NK58 231 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 SCAMP1O15126 338 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 TPD52L2O43399 206 aaKnown RBP3.53□□□□□ -1.84
LINC00616-202ENST00000505874 EIF3JO75822 258 aaKnown RBP3.53□□□□□ -1.84
LINC00616-202ENST00000505874 H1F0P07305 194 aaKnown RBP3.53□□□□□ -1.84
LINC00616-202ENST00000505874 FAM157CP0CG43 387 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 ACP2P11117 423 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 ACTN1P12814 892 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 DSCR10P59022 87 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 PPARDQ03181 441 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 RRS1Q15050 365 aaKnown RBP3.53□□□□□ -1.84
LINC00616-202ENST00000505874 SLC16A9Q7RTY1 509 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 LYG1Q8N1E2 194 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 TMTC2Q8N394 836 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 NGEFQ8N5V2 710 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 MRGPRDQ8TDS7 321 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 GRHL3Q8TE85 626 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 GIMAP5Q96F15 307 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 OR2A14Q96R47 310 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 IWS1Q96ST2 819 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 CABLES2Q9BTV7 478 aa3.53□□□□□ -1.84
LINC00616-202ENST00000505874 MCRIP2Q9BUT9 160 aaKnown RBP3.53□□□□□ -1.84
LINC00616-202ENST00000505874 PLK3Q9H4B4 646 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms