RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 C8orf82Q6P1X6 216 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 GOLGA7Q7Z5G4 137 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF570Q96NI8 536 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF184Q99676 751 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 LBHD1Q9BQE6 289 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZSCAN5AQ9BUG6 496 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 LMAN2LQ9H0V9 348 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 AIG1Q9NVV5 245 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 PCDHGA7Q9Y5G6 932 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ST14Q9Y5Y6 855 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 WASF2Q9Y6W5 498 aa17.01■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP6AP2A0A1C7CYW4 349 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 PABPN1LA6NDY0 278 aaKnown RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 PPP6CO00743 305 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 NUAK1O60285 661 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP6AP2O75787 350 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 XPAP23025 273 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP13A5Q4VNC0 1218 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 IRAK1BP1Q5VVH5 260 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 DPPA4Q7L190 304 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 NRSN1Q8IZ57 195 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CHST14Q8NCH0 376 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CD244Q9BZW8 370 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 FAM83DQ9H4H8 585 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 OPTCQ9UBM4 332 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 HCFC2Q9Y5Z7 792 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CASQ2O14958 399 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ANGPT2O15123 496 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CFLARO15519 480 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 PEX1O43933 1283 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 NPPAP01160 153 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CYP17A1P05093 508 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ANXA5P08758 320 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CISD3P0C7P0 127 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 LINC00032P0C843 101 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 HNMTP50135 292 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 MAD2L1Q13257 205 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 EIF4HQ15056 248 aaKnown RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ERAP2Q6P179 960 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 SPNS2Q8IVW8 549 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 C7orf61Q8IZ16 206 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 CATSPER1Q8NEC5 780 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 LKAAEAR1Q8TD35 194 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 NRG4Q8WWG1 115 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 EGFL8Q99944 293 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 NOL11Q9H8H0 719 aaKnown RBP17■□□□□ 0.31
TRAPPC11-204ENST00000505676 WWOXQ9NZC7 414 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRPS1Q9UHF7 1281 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 ANGPTL3Q9Y5C1 460 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 GPR45Q9Y5Y3 372 aa17■□□□□ 0.31
TRAPPC11-204ENST00000505676 K7EPI3 171 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 FBP2O00757 339 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 BAG2O95816 211 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 FTH1P02794 183 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP1B2P14415 290 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ERVK-21P61565 698 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 NTHL1P78549 312 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 CEACAM7Q14002 265 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP6AP1LQ52LC2 224 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 CLDN19Q8N6F1 224 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ATP6V1E2Q96A05 226 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 RHBDF1Q96CC6 855 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZSWIM3Q96MP5 696 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 VPS35Q96QK1 796 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 KCNA7Q96RP8 456 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 NTMT1Q9BV86 223 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 SLC29A3Q9BZD2 475 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF225Q9UK10 706 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 PPM1HQ9ULR3 514 aa16.99■□□□□ 0.31
TRAPPC11-204ENST00000505676 LEFTY1O75610 366 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 OR4F21O95013 312 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 PRNPP04156 253 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 EBLN1P0CF75 366 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 AOAHP28039 575 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 GGT5P36269 586 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 GPM6BQ13491 265 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 TRIM25Q14258 630 aaKnown RBP16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 ZNF284Q2VY69 593 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 EML3Q32P44 896 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 MAP7D1Q3KQU3 841 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 LDLRAP1Q5SW96 308 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 TMEM215Q68D42 235 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 LRRC70Q7Z2Q7 622 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 FUNDC1Q8IVP5 155 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 MINDY1Q8N5J2 469 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 DDHD1Q8NEL9 900 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 METTL6Q8TCB7 284 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 PPP3R2Q96LZ3 170 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 FAM83CQ9BQN1 747 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 SPATA16Q9BXB7 569 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 MUC13Q9H3R2 512 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 HEBP1Q9NRV9 189 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 DZANK1Q9NVP4 752 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 ADA2Q9NZK5 511 aa16.98■□□□□ 0.31
TRAPPC11-204ENST00000505676 TMEM181Q9P2C4 612 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms