RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 NVLO15381 856 aaKnown RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SLC35G4P0C7Q5 338 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 ATP1B2P14415 290 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 ACRV1P26436 265 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 LEPRP48357 1165 aaKnown RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SESN2P58004 480 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 KRT33BQ14525 404 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 AGAP9Q5VTM2 703 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 ANKS6Q68DC2 871 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 WDR74Q6RFH5 385 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 CCDC81Q6ZN84 652 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 FAM92BQ6ZTR7 304 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 GPR155Q7Z3F1 870 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 PLXDC1Q8IUK5 500 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 PIANPQ8IYJ0 282 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 MAIP1Q8WWC4 291 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 ZNF514Q96K75 400 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 TAAR9Q96RI9 348 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SLC40A1Q9NP59 571 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SMARCAL1Q9NZC9 954 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 OGFRQ9NZT2 677 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 SLC2A6Q9UGQ3 507 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 TTC7AQ9ULT0 858 aaPredicted RBP13.96□□□□□ -0.17
HOXC9-202ENST00000504557 B3GALT1Q9Y5Z6 326 aa13.96□□□□□ -0.17
HOXC9-202ENST00000504557 CCDC162PA2VCL2 907 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 ERI2A8K979 691 aaKnown RBP13.95□□□□□ -0.18
HOXC9-202ENST00000504557 SGTAO43765 313 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 KCNJ13O60928 360 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 PPP1CAP62136 330 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 CRADDP78560 199 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 CACNG1Q06432 222 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 FOXM1Q08050 763 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 DMPKQ09013 629 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 BRD3Q15059 726 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 DBN1Q16643 649 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 SKIDA1Q1XH10 827 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 GPR33Q49SQ1 333 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 BCL7AQ4VC05 210 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 WASH2PQ6VEQ5 465 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 OR6P1Q8NGX9 317 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 OR2L2Q8NH16 312 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 HDAC10Q969S8 669 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 INSM2Q96T92 566 aaPredicted RBP13.95□□□□□ -0.18
HOXC9-202ENST00000504557 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 WASH6PQ9NQA3 447 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
HOXC9-202ENST00000504557 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
HOXC9-202ENST00000504557 HEATR9A2RTY3 570 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 KIF1CO43896 1103 aaKnown RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 LIPCP11150 499 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 MTHFD1P11586 935 aaKnown RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 PREPP48147 710 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 ARCN1P48444 511 aaKnown RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 PRLHRP49683 370 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 UCNP55089 124 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 DCAF12Q5T6F0 453 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 TSTD2Q5T7W7 516 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 KIAA1614Q5VZ46 1190 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 METRNLQ641Q3 311 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 NAPRTQ6XQN6 538 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 SLC35F6Q8N357 371 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 ELMO2Q96JJ3 720 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 ZNF778Q96MU6 729 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 CCNL2Q96S94 520 aaPredicted RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 CCM2Q9BSQ5 444 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 EPB41L1Q9H4G0 881 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 APMAPQ9HDC9 416 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 DRG1Q9Y295 367 aaKnown RBP13.94□□□□□ -0.18
HOXC9-202ENST00000504557 PRSS21Q9Y6M0 314 aa13.94□□□□□ -0.18
HOXC9-202ENST00000504557 EIF4E1BA6NMX2 242 aaKnown RBP13.93□□□□□ -0.18
HOXC9-202ENST00000504557 AGAP14A8MT82 685 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 H7C0S8 307 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 SUN1O94901 812 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 GOT2P00505 430 aaKnown RBP13.93□□□□□ -0.18
HOXC9-202ENST00000504557 ITGB6P18564 788 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 ADRA1DP25100 572 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 CAPZBP47756 277 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 CSE1LP55060 971 aaKnown RBP13.93□□□□□ -0.18
HOXC9-202ENST00000504557 PRAMEP78395 509 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 VAC14Q08AM6 782 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 CACHD1Q5VU97 1274 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 ARHGAP22Q7Z5H3 698 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 REXO1L1PQ8IX06 675 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 OTUD6BQ8N6M0 293 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 PRELID2Q8N945 189 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 OR13J1Q8NGT2 312 aa13.93□□□□□ -0.18
HOXC9-202ENST00000504557 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms