RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 EIF3HO15372 352 aaKnown RBP eCLIP5.16□□□□□ -1.585e-6■□□□□ 8.9
NIPBL-204ENST00000504430 B4GALT4O60513 344 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 CBR3O75828 277 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PNLIPP16233 465 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 FNTAP49354 379 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ENTPD1P49961 510 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 B2MP61769 119 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 RBPJQ06330 500 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PDK4Q16654 411 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ARL13AQ5H913 290 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PRAMEF7Q5VXH5 474 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PHLDB2Q86SQ0 1253 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 CLEC14AQ86T13 490 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 GPAT4Q86UL3 456 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 BEND7Q8N7W2 519 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SMARCC2Q8TAQ2 1214 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NSMAFQ92636 917 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ISG20Q96AZ6 181 aaKnown RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ORAI1Q96D31 301 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TPD52L3Q96J77 140 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SIGLEC11Q96RL6 698 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PCYT2Q99447 389 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ELOVL1Q9BW60 279 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NAPBQ9H115 298 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 FBXO44Q9H4M3 255 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 MED20Q9H944 212 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 LMAN1LQ9HAT1 526 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 RANGRFQ9HD47 186 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 MMP25Q9NPA2 562 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 FBXO4Q9UKT5 387 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SLC5A6Q9Y289 635 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 COPG1Q9Y678 874 aaKnown RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 KCNAB3O43448 404 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 F13BP05160 661 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 SRPRAP08240 638 aaKnown RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 CCDC130P13994 396 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 ANXA7P20073 488 aaKnown RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 PAICSP22234 425 aaKnown RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 POU1F1P28069 291 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 GPR4P46093 362 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 B4GALNT1Q00973 533 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 DMWDQ09019 674 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 ABRQ12979 859 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 RRP1BQ14684 758 aaKnown RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 STILQ15468 1287 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 TAPT1Q6NXT6 567 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 C17orf99Q6UX52 265 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 SCARA5Q6ZMJ2 495 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 ZBTB49Q6ZSB9 765 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 TMEM130Q8N3G9 435 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 ANKFN1Q8N957 763 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 BBS1Q8NFJ9 593 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 CLHC1Q8NHS4 586 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 BBS10Q8TAM1 723 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 SLC47A1Q96FL8 570 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 MSANTD3Q96H12 275 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 OXNAD1Q96HP4 312 aaPredicted RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 PNNQ9H307 717 aaKnown RBP5.15□□□□□ -1.58
NIPBL-204ENST00000504430 OSGEPL1Q9H4B0 414 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 EXO5Q9H790 373 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 BABAM1Q9NWV8 329 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 NLKQ9UBE8 527 aa5.15□□□□□ -1.58
NIPBL-204ENST00000504430 C5orf52A6NGY3 159 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 YDJCA8MPS7 323 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 OIP5O43482 229 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 SNNO75324 88 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CBX6O95503 412 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 GNAZP19086 355 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CTNNA2P26232 953 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 ATP2C1P98194 919 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CHRNA6Q15825 494 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 BEX5Q5H9J7 111 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 PIP5KL1Q5T9C9 394 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 KRT40Q6A162 431 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CCDC144NLQ6NUI1 221 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 ETV3LQ6ZN32 361 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CYP4V2Q6ZWL3 525 aaPredicted RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 ADGRF4Q8IZF3 695 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 RLN3Q8WXF3 142 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 MARS2Q96GW9 593 aaKnown RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 C5orf34Q96MH7 638 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 PLIN2Q99541 437 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 CRNKL1Q9BZJ0 848 aaKnown RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 TOR3AQ9H497 397 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 SRD5A3Q9H8P0 318 aa5.15□□□□□ -1.59
NIPBL-204ENST00000504430 TRNAU1APQ9NX07 287 aaKnown RBP5.15□□□□□ -1.59
NIPBL-204ENST00000504430 A0A0U1RQV5 110 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 LNP1A1A4G5 178 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 YKT6O15498 198 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 PRPH2P23942 346 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 PKLRP30613 574 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 SHMT1P34896 483 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 ALDH7A1P49419 539 aaKnown RBP5.14□□□□□ -1.59
NIPBL-204ENST00000504430 SUCLG1P53597 346 aaKnown RBP5.14□□□□□ -1.59
NIPBL-204ENST00000504430 CSRP2Q16527 193 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 SLC36A3Q495N2 470 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 ATF7IP2Q5U623 682 aa5.14□□□□□ -1.59
NIPBL-204ENST00000504430 PRSS42Q7Z5A4 293 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms