RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 HMGXB4Q9UGU5 601 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CNOT6Q9ULM6 557 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 PPIEQ9UNP9 301 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 TOP3BO95985 862 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 VIPP01282 170 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CMPK1P30085 196 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 TRIM32Q13049 653 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ZDHHC24Q6UX98 284 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 TMC8Q8IU68 726 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CBR4Q8N4T8 237 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 MBD2Q9UBB5 411 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 MTRRQ9UBK8 725 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 EIF2B4Q9UI10 523 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 MAP4K5Q9Y4K4 846 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ITPKBP27987 946 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 PIK3R6Q5UE93 754 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CPNE9Q8IYJ1 553 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF354BQ96LW1 612 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CADM1Q9BY67 442 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 RWDD3Q9Y3V2 267 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 LOC110117498-PIK3R3F6TDL0 507 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 PEX10O60683 326 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 RNASEH2AO75792 299 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 LAMP2P13473 410 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC1A2P43004 574 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ZBTB6Q15916 424 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 SNAPC1Q16533 368 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 SOWAHAQ2M3V2 549 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 DAW1Q8N136 415 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 DNAJB8Q8NHS0 232 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 AZIN2Q96A70 460 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 NARS2Q96I59 477 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 SEZ6LQ9BYH1 1024 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 BRINP2Q9C0B6 783 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 TIMMDC1Q9NPL8 285 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 C1orf109Q9NX04 203 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 METTL18O95568 372 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 DMPKQ09013 629 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 PLEKHG4Q58EX7 1191 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 DCST1Q5T197 706 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 TRMT10BQ6PF06 316 aaKnown RBP16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 DCBLD1Q8N8Z6 715 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 GIPC3Q8TF64 312 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 TFB2MQ9H5Q4 396 aaKnown RBP16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 ZDHHC18Q9NUE0 388 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 TLR6Q9Y2C9 796 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 IQCF5A8MTL0 148 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 TMEM63AO94886 807 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 LYNP07948 512 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 PTPN2P17706 415 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 GET4Q7L5D6 327 aaPredicted RBP16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 PEX5LQ8IYB4 626 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 CD84Q9UIB8 345 aa16.33■□□□□ 0.21
PCDHA1-203ENST00000504120 DNM1LO00429 736 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 IDH3BO43837 385 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 LGR5O75473 907 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 ANGPTL1O95841 491 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 C2orf73Q8N5S3 287 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 ARL14EPQ8N8R7 260 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 NAT8LQ8N9F0 302 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 SLC38A4Q969I6 547 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 EXOSC8Q96B26 276 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 PDCD10Q9BUL8 212 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 OSBPL7Q9BZF2 842 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 TEX28O15482 410 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 CDH3P22223 829 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 SRSF11Q05519 484 aaKnown RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 DLG1Q12959 904 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 TEAD4Q15561 434 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 PDPRQ8NCN5 879 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF516Q92618 1163 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 PCBD2Q9H0N5 130 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 ELL3Q9HB65 397 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 CALML5Q9NZT1 146 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF222Q9UK12 451 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 PCDHGA11Q9Y5H2 935 aa16.33■□□□□ 0.2
PCDHA1-203ENST00000504120 IRAK2O43187 625 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CAP1Q01518 475 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ZNF460Q14592 562 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM131AQ6UXB0 335 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CMASQ8NFW8 434 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 AJAP1Q9UKB5 411 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 WBP11Q9Y2W2 641 aaKnown RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM92AA1XBS5 289 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 MAGEB17A8MXT2 336 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PCCBP05166 539 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 FAM163BP0C2L3 166 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PTX3P26022 381 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 PRKD1Q15139 912 aaPredicted RBP16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 LIN52Q52LA3 116 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 SH3PXD2AQ5TCZ1 1133 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 BICRALQ6AI39 1079 aa16.32■□□□□ 0.2
PCDHA1-203ENST00000504120 ATG14Q6ZNE5 492 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms