RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 UGT3A2Q3SY77 523 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 FAM219BQ5XKK7 198 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 FAM151BQ6UXP7 276 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 CYHR1Q6ZMK1 362 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 GRAMD2AQ8IUY3 354 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 CPNE9Q8IYJ1 553 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 DSELQ8IZU8 1212 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 FBXW8Q8N3Y1 598 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 RIN3Q8TB24 985 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 EEF1AKMT1Q8WVE0 214 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 RPL10LQ96L21 214 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 NSUN5Q96P11 429 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 LRRC42Q9Y546 428 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 PCDHB1Q9Y5F3 818 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 CAPN8A6NHC0 703 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 HNRNPCL2B2RXH8 293 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 STX16-NPEPL1H3BU86 382 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 J3KRW8 73 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 STX16O14662 325 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 AZIN1O14977 448 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 KLK8O60259 260 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 MOSPD3O75425 235 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 GPC4O75487 556 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 RFPL2O75678 378 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 CLDN7O95471 211 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 PRAMEF1O95521 474 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 RPS17P08708 135 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 DDX6P26196 483 aaKnown RBP eCLIP11.43□□□□□ -0.58
USP46-204ENST00000503060 HLA-FP30511 346 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 VHLP40337 213 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 ASMTP46597 345 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 CLCN7P51798 805 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 MTTPP55157 894 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 SNRPD1P62314 119 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 FUT11Q495W5 492 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 ANKS6Q68DC2 871 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 UGT3A1Q6NUS8 523 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 ZSWIM9Q86XI8 627 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 HPS6Q86YV9 775 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 ZNF540Q8NDQ6 660 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 TRPC4APQ8TEL6 797 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 NRG4Q8WWG1 115 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 BADQ92934 168 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 RAD9AQ99638 391 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 SARS2Q9NP81 518 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 ANGPTL2Q9UKU9 493 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 EDARQ9UNE0 448 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 HS3ST2Q9Y278 367 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 WASF2Q9Y6W5 498 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 KIAA0100Q14667 2235 aaKnown RBP11.42□□□□□ -0.58
USP46-204ENST00000503060 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 IQCF5A8MTL0 148 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 FKBP6O75344 327 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 FGF19O95750 216 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 PTPN2P17706 415 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 RPS3P23396 243 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP46-204ENST00000503060 CA5AP35218 305 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 HOXD12P35452 270 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 ERFP50548 548 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 CLCQ05315 142 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 FPGSQ05932 587 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 LCP2Q13094 533 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 MYLK3Q32MK0 819 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 EML3Q32P44 896 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
USP46-204ENST00000503060 C22orf39Q6P5X5 142 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 GK5Q6ZS86 529 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 LARP4Q71RC2 724 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP46-204ENST00000503060 ARHGAP22Q7Z5H3 698 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 SNX20Q7Z614 316 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 TMEM25Q86YD3 366 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 FAM9CQ8IZT9 166 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 VOPP1Q96AW1 172 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 ISG20Q96AZ6 181 aaKnown RBP11.42□□□□□ -0.58
USP46-204ENST00000503060 CCDC124Q96CT7 223 aaKnown RBP11.42□□□□□ -0.58
USP46-204ENST00000503060 C19orf60Q96EN9 201 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 GIMAP5Q96F15 307 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 ZNF570Q96NI8 536 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 C1QTNF3Q9BXJ4 246 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 ASB8Q9H765 288 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 EFCAB1Q9HAE3 211 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 APPL1Q9UKG1 709 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 TMCO1Q9UM00 188 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 DUSP12Q9UNI6 340 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 POMPQ9Y244 141 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 DHRS7Q9Y394 339 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
USP46-204ENST00000503060 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 GRM6O15303 877 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 AKAP10O43572 662 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 NDUFB5O43674 189 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 BAG2O95816 211 aa11.41□□□□□ -0.58
USP46-204ENST00000503060 ANPEPP15144 967 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms