RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MMP13P45452 471 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 AMPHP49418 695 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 CTSCP53634 463 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 HNRNPKP61978 463 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 MZT1Q08AG7 82 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 MEP1BQ16820 701 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 TYSND1Q2T9J0 566 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 PRTGQ2VWP7 1150 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 RGMBQ6NW40 437 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 MOXD1Q6UVY6 613 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 C11orf57Q6ZUT1 292 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 OTOAQ7RTW8 1153 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 ATG9AQ7Z3C6 839 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 ABI3BPQ7Z7G0 1075 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 NANOGP1Q8N7R0 232 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 ACVR1CQ8NER5 493 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 FIBINQ8TAL6 211 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 PTP4A1Q93096 173 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 SPSB1Q96BD6 273 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 SPDL1Q96EA4 605 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 FAM81BQ96LP2 452 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 INTS14Q96SY0 518 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 C16orf70Q9BSU1 422 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 MLPHQ9BV36 600 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 FUT8Q9BYC5 575 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 MMADHCQ9H3L0 296 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 DBNDD1Q9H9R9 158 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 TRPV4Q9HBA0 871 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZBTB40Q9NUA8 1239 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 KCNK7Q9Y2U2 307 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 CUX1P39880 1505 aa5.17□□□□□ -1.58
HMGB1P3-201ENST00000502802 PRAG1Q86YV5 1406 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 PBRM1Q86U86 1689 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 IFIT3O14879 490 aaKnown RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 XRCC3O43542 346 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 TGFB3P10600 412 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 HNF4AP41235 474 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 AMTP48728 403 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 NAGLUP54802 743 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 CD81P60033 236 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 CRYZQ08257 329 aaKnown RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 GPS2Q13227 327 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 SRSF7Q16629 238 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 LEXMQ3ZCV2 418 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 FAM69BQ5VUD6 431 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 MORN5Q5VZ52 161 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 PLBD1Q6P4A8 553 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 WDR73Q6P4I2 378 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 RAPH1Q70E73 1250 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 SPATA21Q7Z572 469 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 OR2AJ1Q8NGZ0 328 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 MOSPD2Q8NHP6 518 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZFAND2BQ8WV99 257 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 CCDC43Q96MW1 224 aaKnown RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 CAMK1GQ96NX5 476 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 MTERF1Q99551 399 aaKnown RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 FZD8Q9H461 694 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 TBC1D17Q9HA65 648 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 PCDH9Q9HC56 1237 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 NOX4Q9NPH5 578 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 DPP3Q9NY33 737 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 AGO1Q9UL18 857 aaKnown RBP5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 FZD10Q9ULW2 581 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 SNX7Q9UNH6 387 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 LIPT1Q9Y234 373 aa5.16□□□□□ -1.58
HMGB1P3-201ENST00000502802 SOGA1O94964 1423 aa5.15□□□□□ -1.58
HMGB1P3-201ENST00000502802 FGD5Q6ZNL6 1462 aa5.15□□□□□ -1.58
HMGB1P3-201ENST00000502802 A0A1W2PP11 408 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 FEZF1A0PJY2 475 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 BICDL2A1A5D9 508 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR2M5A3KFT3 312 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PTGESO14684 152 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 RAB40ALP0C0E4 278 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 ADRA2CP18825 462 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PSMA3P25788 255 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 LMO1P25800 156 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 C21orf33P30042 268 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 HOXD3P31249 432 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 CRKLP46109 303 aaKnown RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 RFX2P48378 723 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 ROR2Q01974 943 aaKnown RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PPATQ06203 517 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 EZH2Q15910 746 aaKnown RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 MTX3Q5HYI7 312 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PXDC1Q5TGL8 231 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 FAM91A1Q658Y4 838 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 ZNF626Q68DY1 528 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 LINC00696Q6ZRV3 163 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 MRPL10Q7Z7H8 261 aaKnown RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 TIGD4Q8IY51 512 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 ARL10Q8N8L6 244 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 NEXN-AS1Q8NBZ9 246 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 OR5R1Q8NH85 324 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 GRAPLQ8TC17 118 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 MGARPQ8TDB4 240 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 PPP4R1Q8TF05 950 aa5.15□□□□□ -1.59
HMGB1P3-201ENST00000502802 SLC44A1Q8WWI5 657 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms