RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SPG21Q9NZD8 308 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 VPS18Q9P253 973 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 FBXO40Q9UH90 709 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 DDX25Q9UHL0 483 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC25A13Q9UJS0 675 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SNX6Q9UNH7 406 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZFR2Q9UPR6 939 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 EXO1Q9UQ84 846 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF148Q9UQR1 794 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 LAMB4A4D0S4 1761 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ATP10DQ9P241 1426 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ANKRD31Q8N7Z5 1873 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 IBTKQ9P2D0 1353 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 AFDNP55196 1824 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF804BA4D1E1 1349 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PTPRCP08575 1304 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A1B0GTW7 788 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A1W2PPM1 405 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 XKRY2A2RUG3 117 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CFAP73A6NFT4 308 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MAGEB17A8MXT2 336 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ERVV-1B6SEH8 477 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 F5H697 171 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CXCL11O14625 94 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CTAGE5O15320 804 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPR42O15529 346 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPRIN2O60269 458 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 SELENOFO60613 162 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MTX2O75431 263 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MED24O75448 989 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 BCAR3O75815 825 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR6B1O95007 311 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ENO1P06733 434 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 C8AP07357 584 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 HOXB7P09629 217 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 EBLN1P0CF75 366 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 C8orf89P0DMQ9 161 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TCF4P15884 667 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 FUT1P19526 365 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MMP8P22894 467 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PSMA5P28066 241 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 STIP1P31948 543 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CDAP32320 146 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 GJC1P36383 396 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 IGHMBP2P38935 993 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 GABRB2P47870 512 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NDUFV1P49821 464 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CLCNKAP51800 687 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 DGKQP52824 942 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NAGLUP54802 743 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 YWHAZP63104 245 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 B4GALNT1Q00973 533 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 FPGSQ05932 587 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 FOXL1Q12952 345 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PLD1Q13393 1074 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 VEPH1Q14D04 833 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 KRT24Q2M2I5 525 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC57Q2TAC2 916 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 RIPPLY2Q5TAB7 128 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 OGFOD2Q6N063 350 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 BRAT1Q6PJG6 821 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CES3Q6UWW8 571 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 C11orf57Q6ZUT1 292 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRSS45Q7RTY3 260 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 SYVN1Q86TM6 617 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF410Q86VK4 478 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 IZUMO1Q8IYV9 350 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF34Q8IZ26 560 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PDCL2Q8N4E4 241 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MNS1Q8NEH6 495 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 AGBL3Q8NEM8 1001 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 EXOC6Q8TAG9 804 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF671Q8TAW3 534 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 HEXDCQ8WVB3 486 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 OSCP1Q8WVF1 389 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TMEM125Q96AQ2 219 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NXNL1Q96CM4 212 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC51Q96ER9 411 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CEP295NLQ96MC4 621 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TTC25Q96NG3 672 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CDK5RAP1Q96SZ6 601 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 EGFL8Q99944 293 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 INPP5KQ9BT40 448 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 RTN4RQ9BZR6 473 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 MEGF9Q9H1U4 602 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CLSTN2Q9H4D0 955 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 YY1AP1Q9H869 796 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NOL11Q9H8H0 719 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TCF7L2Q9NQB0 619 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRMT8Q9NR22 394 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TCP11L1Q9NUJ3 509 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRPM5Q9NZQ8 1165 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 CTTNBP2NLQ9P2B4 639 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 NLKQ9UBE8 527 aa4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRMT6Q9UJA5 497 aaKnown RBP4.28□□□□□ -1.72
HMGB1P21-201ENST00000502313 N6AMT1Q9Y5N5 214 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms