RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CEP41Q9BYV8 373 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 KLHL25Q9H0H3 589 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 ACTR5Q9H9F9 607 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FANCEQ9HB96 536 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FANCLQ9NW38 375 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 ENTPD4Q9Y227 616 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FER1L5A0AVI2 2057 aa8.9□□□□□ -0.99
CCDC171-209ENST00000498725 PDZD2O15018 2839 aa8.9□□□□□ -0.99
CCDC171-209ENST00000498725 APCP25054 2843 aa8.9□□□□□ -0.99
CCDC171-209ENST00000498725 DIDO1Q9BTC0 2240 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 RGSL1A5PLK6 1076 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 SLC9B1P1A6NJY1 282 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 OR2AG2A6NM03 316 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 GPR89AB7ZAQ6 455 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 C9J4A7 227 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 VEGFDO43915 354 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ALOX12BO75342 701 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ZBTB11O95625 1053 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ALPPP05187 535 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 MMP2P08253 660 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 GPR89BP0CG08 455 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 BPIP17213 487 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 CDH3P22223 829 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 CES1P23141 567 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 KPNA2P52292 529 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 FOXL2P58012 376 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 RPL26P61254 145 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 TMEM115Q12893 351 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 NFE2L1Q14494 772 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 SLC9A5Q14940 896 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ZRSR2Q15696 482 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 HIF1AQ16665 826 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 IFI16Q16666 785 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ZXDCQ2QGD7 858 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 BOLA3Q53S33 107 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 CDKAL1Q5VV42 579 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ALG1LQ6GMV1 187 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 TIGD7Q6NT04 549 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 IRF2BP2Q7Z5L9 587 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 KCNMB4Q86W47 210 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 OOSP2Q86WS3 158 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 KMT5CQ86Y97 462 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 GALNT16Q8N428 558 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 CLEC1AQ8NC01 280 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 OR1L3Q8NH93 324 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 NAT14Q8WUY8 206 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 MAML1Q92585 1016 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ADGRE3Q9BY15 652 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 WWP1Q9H0M0 922 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 AGPAT4Q9NRZ5 378 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 PCMTD2Q9NV79 361 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 HAUS2Q9NVX0 235 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 SEMA5BQ9P283 1151 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 C5AR2Q9P296 337 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 TMPRSS11EQ9UL52 423 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 RPL26L1Q9UNX3 145 aaKnown RBP8.89□□□□□ -0.99
CCDC171-209ENST00000498725 ZNF711Q9Y462 761 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
CCDC171-209ENST00000498725 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 GSAPA4D1B5 854 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 KCNK1O00180 336 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 PEX12O00623 359 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 GPR39O43194 453 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 POP7O75817 140 aaKnown RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 CCDC172P0C7W6 258 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ATP1A3P13637 1013 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 CCNCP24863 283 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 PCK1P35558 622 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 LMAN1P49257 510 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 GALNT2Q10471 571 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 KRT33BQ14525 404 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 MYBPC3Q14896 1274 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 NCF4Q15080 339 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ASIC2Q16515 512 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ATP13A5Q4VNC0 1218 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ATP13A4Q4VNC1 1196 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 C1orf189Q5VU69 101 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 NCBP2-AS2Q69YL0 99 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 TMEM220Q6QAJ8 160 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 WASH2PQ6VEQ5 465 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 SPOCD1Q6ZMY3 1216 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 DET1Q7L5Y6 550 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 MRGPREQ86SM8 312 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 AMZ2Q86W34 360 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ZGRF1Q86YA3 2104 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 TMEM151BQ8IW70 566 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 RAVER1Q8IY67 606 aaKnown RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 BEND7Q8N7W2 519 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 OR4E2Q8NGC2 313 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 OR8K5Q8NH50 307 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 GRHL3Q8TE85 626 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 CNDP1Q96KN2 507 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 INSM2Q96T92 566 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-209ENST00000498725 CD180Q99467 661 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 DEF6Q9H4E7 631 aa8.88□□□□□ -0.99
CCDC171-209ENST00000498725 ZNF552Q9H707 407 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms