RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 F8W8V4 182 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 QSOX1O00391 747 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 AVILO75366 819 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 DXOO77932 396 aaKnown RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 OR56A5P0C7T3 313 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 NMBRP28336 390 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 MAGEA6P43360 314 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 CFHR1Q03591 330 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 TRA2AQ13595 282 aaKnown RBP eCLIP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 RPE65Q16518 533 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 ANKRD22Q5VYY1 191 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 MCUQ8NE86 351 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 PRR11Q96HE9 360 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 SGSM3Q96HU1 749 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 INSM2Q96T92 566 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 KIFC1Q9BW19 673 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 WWP1Q9H0M0 922 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 THSD1Q9NS62 852 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 KCND1Q9NSA2 647 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 IMP3Q9NV31 184 aaKnown RBP12.54□□□□□ -0.4
HSPG2-213ENST00000498495 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 LOXL2Q9Y4K0 774 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF106Q9H2Y7 1883 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 MAGEB16A2A368 324 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 LILRA5A6NI73 299 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 SDR42E2A6NKP2 422 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 A8MU76 341 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 RRP8O43159 456 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 UBXN7O94888 489 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 GSTM1P09488 218 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 SLC35G4P0C7Q5 338 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 MLNP12872 115 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 HGFP14210 728 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 TYRP1P17643 537 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CSTF2P33240 577 aaKnown RBP eCLIP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 MLLT3P42568 568 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 GSTM4Q03013 218 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 KRT33BQ14525 404 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 SNAP47Q5SQN1 464 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 LRRC69Q6ZNQ3 347 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 KLHL7Q8IXQ5 586 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 MFSD3Q96ES6 412 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 C12orf66Q96MD2 445 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 TREX1Q9NSU2 369 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CATSPERZQ9NTU4 200 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 TMEM9Q9P0T7 183 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 SAMD15Q9P1V8 674 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 PISDQ9UG56 409 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 PCYOX1Q9UHG3 505 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 CFAP20Q9Y6A4 193 aaKnown RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 COLEC10Q9Y6Z7 277 aa12.53□□□□□ -0.4
HSPG2-213ENST00000498495 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-213ENST00000498495 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CCDC188H7C350 402 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 IFRD1O00458 451 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 HGSO14964 777 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 FTH1P02794 183 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ITGA2BP08514 1039 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 THRAP10827 490 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 MTHFD1P11586 935 aaKnown RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 PAMP19021 973 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CASQ1P31415 396 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CSF2RBP32927 897 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 TTPAP49638 278 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 MAPK10P53779 464 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 GPR18Q14330 331 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ARMC3Q5W041 872 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CAPRIN2Q6IMN6 1127 aaKnown RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 PACS1Q6VY07 963 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 PCGF5Q86SE9 256 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 SDCCAG8Q86SQ7 713 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 PPIL6Q8IXY8 311 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms