RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 WDR43Q15061 677 aaKnown RBP eCLIP2.78□□□□□ -1.96
RIF1-212ENST00000498041 CCDC96Q2M329 555 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 ZSCAN23Q3MJ62 389 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 LRIF1Q5T3J3 769 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 SNX30Q5VWJ9 437 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 LCN10Q6JVE6 187 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 PAPD4Q6PIY7 484 aaKnown RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 ZNF704Q6ZNC4 412 aaPredicted RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 USP43Q70EL4 1123 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 DSG4Q86SJ6 1040 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 SDCCAG8Q86SQ7 713 aaPredicted RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 SLC9B2Q86UD5 537 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 TMPRSS12Q86WS5 348 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 MAP7D3Q8IWC1 876 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 ACVR1CQ8NER5 493 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 OR13A1Q8NGR1 328 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 OR1J2Q8NGS2 313 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 OR8K5Q8NH50 307 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 HM13Q8TCT9 377 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 FRAT1Q92837 279 aaPredicted RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 ZKSCAN4Q969J2 545 aaPredicted RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 C1orf74Q96LT6 269 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 NODALQ96S42 347 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 LRRC1Q9BTT6 524 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 PIGMQ9H3S5 423 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 SH2D4AQ9H788 454 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 KRT84Q9NSB2 600 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 TXLNGQ9NUQ3 528 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 HCFC1R1Q9NWW0 138 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 CORO1CQ9ULV4 474 aaPredicted RBP2.78□□□□□ -1.96
RIF1-212ENST00000498041 DLGAP4Q9Y2H0 992 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 LYVE1Q9Y5Y7 322 aa2.78□□□□□ -1.96
RIF1-212ENST00000498041 OVOS2A0A0J9YW53 1432 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 OVOS2Q6IE36 1432 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 POLR3AO14802 1390 aaPredicted RBP2.77□□□□□ -1.97
RIF1-212ENST00000498041 MSH6P52701 1360 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 RNF123Q5XPI4 1314 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ITIH6Q6UXX5 1313 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 FANCIQ9NVI1 1328 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ALS2Q96Q42 1657 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 CAMTA1Q9Y6Y1 1673 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 A0A0B4J293 547 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 PI4KAP2A4QPH2 592 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 FAM172BPA6NC97 362 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 PGPEP1LA6NFU8 196 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 EIF4E1BA6NMX2 242 aaKnown RBP2.77□□□□□ -1.97
RIF1-212ENST00000498041 MYO1GB0I1T2 1018 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 CAPN9O14815 690 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KRT86O43790 486 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 LMX1BO60663 402 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 HIST1H2ABP04908 130 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ICAM1P05362 532 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 UMODP07911 640 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 FAM106CPP0CH98 169 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ACADMP11310 421 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 RARGP13631 454 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 CD53P19397 219 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 HIST1H2ADP20671 130 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 AMPHP49418 695 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 DCAF7P61962 342 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KRT81Q14533 505 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 CRYMQ14894 314 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KRTCAP3Q53RY4 240 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 STPG1Q5TH74 334 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 GKAP1Q5VSY0 366 aaPredicted RBP2.77□□□□□ -1.97
RIF1-212ENST00000498041 CCDC30Q5VVM6 783 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 NSUN5P2Q63ZY6 315 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ACSM2BQ68CK6 577 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 FAM180BQ6P0A1 224 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 TMEM154Q6P9G4 183 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KLHL35Q6PF15 583 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 IKBIPQ70UQ0 350 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 HIST3H2AQ7L7L0 130 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 SMIM29Q86T20 159 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 TSPAN33Q86UF1 283 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 TICAM1Q8IUC6 712 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 DCUN1D3Q8IWE4 304 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KBTBD3Q8NAB2 608 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 DMBX1Q8NFW5 382 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 UTP15Q8TED0 518 aaKnown RBP2.77□□□□□ -1.97
RIF1-212ENST00000498041 SLC38A5Q8WUX1 472 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 USP6NLQ92738 828 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 HES6Q96HZ4 224 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 COG3Q96JB2 828 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 EGLN2Q96KS0 407 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 CMTM3Q96MX0 182 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 UHRF2Q96PU4 802 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 ITPAQ9BY32 194 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 TMEM39BQ9GZU3 492 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 MMP28Q9H239 520 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 KAT14Q9H8E8 782 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 EPB41L5Q9HCM4 733 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 MTMR10Q9NXD2 777 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 MDFICQ9P1T7 246 aa2.77□□□□□ -1.97
RIF1-212ENST00000498041 FAM135BQ49AJ0 1406 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 SHANK3Q9BYB0 1731 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.76□□□□□ -1.97
RIF1-212ENST00000498041 SMCHD1A6NHR9 2005 aa2.76□□□□□ -1.97
RIF1-212ENST00000498041 EIF3AQ14152 1382 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms