RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SERPINC1P01008 464 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 TCF4P15884 667 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ARL4AP40617 200 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 NCF4Q15080 339 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 SMTNL2Q2TAL5 461 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ZNF789Q5FWF6 425 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 KLHL35Q6PF15 583 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 FBXO38Q6PIJ6 1188 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 MRGPREQ86SM8 312 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 RAB43Q86YS6 212 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 SYTL1Q8IYJ3 562 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 GALNT16Q8N428 558 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 MAML1Q92585 1016 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 CLIP3Q96DZ5 547 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 PPM1MQ96MI6 270 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ZSCAN5AQ9BUG6 496 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 NUP85Q9BW27 656 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 ITGB1BP2Q9UKP3 347 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 BTRCQ9Y297 605 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 CSAG2Q9Y5P2 127 aa16.07■□□□□ 0.16
VIM-208ENST00000497849 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 MASP2O00187 686 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 KLF7O75840 302 aaPredicted RBP16.06■□□□□ 0.16
VIM-208ENST00000497849 CDK14O94921 469 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 ALPPP05187 535 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 TPM2P07951 284 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 CES1P23141 567 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 OTX2P32243 289 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 UBXN1Q04323 297 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 RPE65Q16518 533 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 PTCHD3Q3KNS1 767 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 DCAF10Q5QP82 559 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 ZADH2Q8N4Q0 377 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 TRAM1L1Q8N609 369 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 TLR10Q9BXR5 811 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
VIM-208ENST00000497849 RBM22Q9NW64 420 aaKnown RBP eCLIP16.06■□□□□ 0.16
VIM-208ENST00000497849 HRASLS2Q9NWW9 162 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 IFNKQ9P0W0 207 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 COPG2Q9UBF2 871 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 TMPRSS11EQ9UL52 423 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 DOCK10Q96BY6 2186 aa16.06■□□□□ 0.16
VIM-208ENST00000497849 VEGFDO43915 354 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 EDN3P14138 238 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 SERPINB6P35237 376 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 HALP42357 657 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 DCDC1P59894 354 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 PLCL1Q15111 1095 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 FKBP15Q5T1M5 1219 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 TMTC4Q5T4D3 741 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 PDPK2PQ6A1A2 396 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 GDF7Q7Z4P5 450 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 FJX1Q86VR8 437 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 OR1L3Q8NH93 324 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 HSPH1Q92598 858 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 GRPEL1Q9HAV7 217 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 ZFYVE1Q9HBF4 777 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 NFKBIL1Q9UBC1 381 aaPredicted RBP16.05■□□□□ 0.16
VIM-208ENST00000497849 TTLL3Q9Y4R7 772 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 PCM1Q15154 2024 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 NAV3Q8IVL0 2385 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 PCNX1Q96RV3 2341 aa16.05■□□□□ 0.16
VIM-208ENST00000497849 TMCO5BA8MYB1 307 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 MATN3O15232 486 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 HLA-DQB2P05538 268 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 MMP2P08253 660 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 STSP08842 583 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 CA4P22748 312 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 PCK1P35558 622 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 KPNA2P52292 529 aaKnown RBP16.04■□□□□ 0.16
VIM-208ENST00000497849 UBASH3AP57075 661 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 NR1I3Q14994 352 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 TESK1Q15569 626 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 ZNF385CQ66K41 422 aaPredicted RBP16.04■□□□□ 0.16
VIM-208ENST00000497849 TXNRD3NBQ6F5E7 133 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 CLEC1AQ8NC01 280 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 GRHL3Q8TE85 626 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 FER1L6-AS2Q96M78 137 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 ACTR5Q9H9F9 607 aaPredicted RBP16.04■□□□□ 0.16
VIM-208ENST00000497849 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
VIM-208ENST00000497849 SOHLH2Q9NX45 425 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 PSMD13Q9UNM6 376 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 NOVA2Q9UNW9 492 aaKnown RBP16.04■□□□□ 0.16
VIM-208ENST00000497849 ANKRD12Q6UB98 2062 aa16.04■□□□□ 0.16
VIM-208ENST00000497849 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 MFSD11O43934 449 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 IPO13O94829 963 aaKnown RBP16.03■□□□□ 0.16
VIM-208ENST00000497849 RARAP10276 462 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 VCLP18206 1134 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 PTGER4P35408 488 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 SOX8P57073 446 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 GALNT2Q10471 571 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 ART3Q13508 389 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 GALNT3Q14435 633 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
VIM-208ENST00000497849 BOLA3Q53S33 107 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms